Objective optimization

With a set linear programming solver (e.g. glpk), GEMSiRV can be used to simulate the imported metabolic network model. Please refer to http://sb.nhri.org.tw/GEMSiRV/en/Installation for setting up GEMSiRV. Given proper constraints and objective function, the flux results of all reactions in the model will be estimated.

You can select a model and a map (if you have) for objective optimization. The flux results can be visualized in the map.



A visualization map with reaction fluxes:


Scroll up on the map to zoom out:



Flux result:


To check the checkbox for outputting nonzero fluxes only.



Scroll up on the map to zoom out: