Version Differences for CISA

(→Contig Integrator for Sequence Assembly)

(→A schematic overview of CISA)

 <br>CISA basically consists of four major phases:
-								# (1) to identify representative contigs and possible extension
+								# (1) identification of the representative contigs and possible extensions
-								# (2) to remove and split the contigs which may be misassembled and to clip the uncertain regions that are located in the end of contigs
+								# (2) removal and splitting of the contigs that may be misassembled, and clipping of uncertain regions that are located at the extremities of the contigs
-								# (3) to iteratively merge contigs with a minimum 30% overlap and to estimate the maximal size of repetitive regions
+								# (3) iterative merging of the contigs with a minimum 30% overlap and estimating the maximal size of repetitive regions
-								# (4) to merge contigs based on the size of repetitive regions.
+								# (4) merging of the contigs based on the size of repetitive regions