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In this study, utilizing state-of-the-art assemblers to generate different sets of contigs for bacterial genomes is conducted. We have developed and built a Contig Integrator for Sequence Assembly (CISA) to integrate the sets of contigs from different assemblers and evaluated the quality of our integrated assembly. Comparing with the assembly generated by each individual assembler, the assembly sequences integrated by CISA has superior contiguity. |
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In this study, utilizing state-of-the-art assemblers to generate different sets of contigs for bacterial genomes is conducted. We have developed and built a Contig Integrator for Sequence Assembly (CISA) to integrate the sets of contigs from different assemblers and evaluated the quality of our integrated assembly. Comparing with the assembly generated by each individual assembler, the assembly sequences integrated by CISA has superior contiguity. |
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= A schematic overview of CISA =
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