(→Evaluation)
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(→Evaluation)
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: The results show that | : The results show that | ||
- | # the integrated contigs output by CISA can be scaffolded by SSPACE to a limited extent, which suggests that our CISA can indeed integrate the sequence information from different assemblies. | + | # the integrated contigs output by CISA can be scaffolded by SSPACE to a limited extent (from 77 to 69), which suggests that our CISA can indeed integrate the sequence information from different assemblies. |
# to introduce the paired-end reads to the pre-assembled contigs generated by Abyss using SSPACE (Abyss+SSPACE) can only reduce the number of contigs to 101, smaller than the effect made by CISA, which suggests that contig integration prior to scaffolding can further enhance the result. | # to introduce the paired-end reads to the pre-assembled contigs generated by Abyss using SSPACE (Abyss+SSPACE) can only reduce the number of contigs to 101, smaller than the effect made by CISA, which suggests that contig integration prior to scaffolding can further enhance the result. |