Version Differences for E. coli
|
(→Sequence assembly)
|
(→Sequence assembly)
|
| Line 24: | |||
| The above assemblers together with the parameter setting have been selected for ''de novo'' assembling of ''E. coli''. | The above assemblers together with the parameter setting have been selected for ''de novo'' assembling of ''E. coli''. | ||
| - | After assembly, we discarded contigs with less than 100bp and evaluated the accuracy of the assemblies based on the Mauve Assembly Matrices (the results are shown below. | + | After assembly, we discarded contigs with less than 100bp and evaluated the accuracy of the assemblies based on the Mauve Assembly Matrices (the results are shown below). |
| * '''Set2''' (Different parameters for Abyss - the assembler provides the lowest number of contigs in Set1) | * '''Set2''' (Different parameters for Abyss - the assembler provides the lowest number of contigs in Set1) | ||