Version Differences for E. coli
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(→Evaluation)
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(→Evaluation)
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| Line 147: | |||
| | align="center" style="background:#f0f0f0;"|'''NumContigs''' | | align="center" style="background:#f0f0f0;"|'''NumContigs''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumAssemblyBases''' | | align="center" style="background:#f0f0f0;"|'''NumAssemblyBases''' | ||
| + | | align="center" style="background:#f0f0f0;"|'''DCJ_Distance''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumMisCalled''' | | align="center" style="background:#f0f0f0;"|'''NumMisCalled''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumUnCalled''' | | align="center" style="background:#f0f0f0;"|'''NumUnCalled''' | ||
| Line 162: | |||
| | align="center" style="background:#f0f0f0;"|'''Blast_IntactCDS''' | | align="center" style="background:#f0f0f0;"|'''Blast_IntactCDS''' | ||
| |- | |- | ||
| - | | Abyss_k29||130||4634010||322||30||118||115||61835||1.3327||40405||0.8719||54||4266||95691||26567||268182||4267 | + | | Abyss_k29||130||4634010||108||322||30||118||115||61835||1.3327||40405||0.8719||54||4266||95691||26567||268182||4267 |
| |- | |- | ||
| - | | Abyss_k31||133||4626205||334||69||123||119||57847||1.2468||29424||0.636||57||4263||96157||26096||222425||4257 | + | | Abyss_k31||133||4626205||107||334||69||123||119||57847||1.2468||29424||0.636||57||4263||96157||26096||222425||4257 |
| |- | |- | ||
| - | | Abyss_k33||135||4644184||354||338||139||119||66355||1.4302||44937||0.9676||78||4242||89001||24907||268398||4263 | + | | Abyss_k33||135||4644184||106||354||338||139||119||66355||1.4302||44937||0.9676||78||4242||89001||24907||268398||4263 |
| |-bgcolor="#66CCFF" | |-bgcolor="#66CCFF" | ||
| | CISA_Set2||106||4635666||327||146||116||102||55420||1.1945||39743||0.8573||64||4256||113377||27272||222663||4269 | | CISA_Set2||106||4635666||327||146||116||102||55420||1.1945||39743||0.8573||64||4256||113377||27272||222663||4269 | ||
| Line 172: | |||
| - | | SOAP_k29||1373||4582756||48||0||466||415||124372||2.6806||7247||0.1581||100||4220||17892||5276||103369||4146 | + | | SOAP_k29||1373||4582756||479||48||0||466||415||124372||2.6806||7247||0.1581||100||4220||17892||5276||103369||4146 |
| |- | |- | ||
| - | | SOAP_k31||1295||4583165||56||0||510||466||121606||2.621||9201||0.2008||121||4199||17003||4286||77302||4094 | + | | SOAP_k31||1295||4583165||519||56||0||510||466||121606||2.621||9201||0.2008||121||4199||17003||4286||77302||4094 |
| |- | |- | ||
| - | | SOAP_k33||2170||4608265||105||0||1470||1380||126273||2.7216||41165||0.8933||507||3813||5391||1449||22953||3379 | + | | SOAP_k33||2170||4608265||1519||105||0||1470||1380||126273||2.7216||41165||0.8933||507||3813||5391||1449||22953||3379 |
| |-bgcolor="#66CCFF" | |-bgcolor="#66CCFF" | ||
| | CISA_Set3||440||4532901||41||0||379||338||132794||2.8621||5627||0.1241||87||4233||23332||6355||103369||4166 | | CISA_Set3||440||4532901||41||0||379||338||132794||2.8621||5627||0.1241||87||4233||23332||6355||103369||4166 | ||
| Line 193: | |||
| | align="center" style="background:#f0f0f0;"|'''NumContigs''' | | align="center" style="background:#f0f0f0;"|'''NumContigs''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumAssemblyBases''' | | align="center" style="background:#f0f0f0;"|'''NumAssemblyBases''' | ||
| + | | align="center" style="background:#f0f0f0;"|'''DCJ_Distance''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumMisCalled''' | | align="center" style="background:#f0f0f0;"|'''NumMisCalled''' | ||
| | align="center" style="background:#f0f0f0;"|'''NumUnCalled''' | | align="center" style="background:#f0f0f0;"|'''NumUnCalled''' | ||
| Line 207: | |||
| | align="center" style="background:#f0f0f0;"|'''Blast_IntactCDS''' | | align="center" style="background:#f0f0f0;"|'''Blast_IntactCDS''' | ||
| |- | |- | ||
| - | | CISA+SSPACE||69||4627290||237||50||94||93||52804||1.1381||37397||0.8082||44||4276||134584||416708||4290 | + | | CISA+SSPACE||69||4627290||??||237||50||94||93||52804||1.1381||37397||0.8082||44||4276||134584||416708||4290 |
| |- | |- | ||
| - | | Abyss+SSPACE||101||4627104||393||735||114||119||54956||1.1845||33747||0.7293||57||4263||107040||268750||4272 | + | | Abyss+SSPACE||101||4627104||89||393||735||114||119||54956||1.1845||33747||0.7293||57||4263||107040||268750||4272 |
| |- | |- | ||
| - | | minimus2+SSPACE||64||4608774||337||54||93||76||75502||1.6273||36021||0.7816||49||4271||150458||420117||4268 | + | | minimus2+SSPACE||64||4608774||64||337||54||93||76||75502||1.6273||36021||0.7816||49||4271||150458||420117||4268 |
| |- | |- | ||
| |} | |} | ||