Version Differences for E. coli 100 bp

| CISA||110||4641820||106||156||64||153||120||44382||0.9566||39138||0.8432||69||4251||77896||25720||222524||4248||106||79212||118||70571||12,(3,4,5)

|-

+

| GAA<sup>#</sup>||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)

+

|-

+

| GAA*||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)

+

|-

| MAIA (split3)||3||4732065||3||109||10520||152||150||412160||8.8834||507027||10.7147||94||4226||1420571||1420571||1861168||3886||-||-||-||-||-

|-

+

-

| GAA*||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)

+

| minimus2<sup>#</sup>||94 ||4588207 ||88 ||233 ||0 ||129 ||103 ||322633 ||6.9538||209679 ||4.5169||76 ||4244 ||86379 ||27964 ||225809 ||4077 ||94 ||88183 ||107 ||68430 ||13,(6,3,4)

|-

| minimus2*||94 ||4588207 ||88 ||233 ||0 ||129 ||103 ||322633 ||6.9538||209679 ||4.5169||76 ||4244 ||86379 ||27964 ||225809 ||4077 ||94 ||88183 ||107 ||68430 ||13,(6,3,4)

|}

[#] Please note that GAA and minimus2 were designed to merge two assemblies at a time, we thus performed all ([http://sb.nhri.org.tw/CISA/en/E_coli_100_all2 runs]) and took the average scores.

[*] Please note that the scores of minimus2 and GAA were taken from the average of ten random combinations ([http://sb.nhri.org.tw/CISA/en/Ecoli_100 details]).

 | CISA||110||4641820||106||156||64||153||120||44382||0.9566||39138||0.8432||69||4251||77896||25720||222524||4248||106||79212||118||70571||12,(3,4,5)
 |-
 								| GAA<sup>#</sup>||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)
 								|-
 								| GAA*||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)
 								|-
 | MAIA (split3)||3||4732065||3||109||10520||152||150||412160||8.8834||507027||10.7147||94||4226||1420571||1420571||1861168||3886||-||-||-||-||-
 |-
-								| GAA*||311 ||4636486 ||222 ||105 ||39 ||216 ||197 ||59416 ||1.2806||22776 ||0.4906||107 ||4213 ||48108 ||13772 ||162326 ||4152 ||261 ||50871 ||248 ||47458 ||6,(3,1,2)
+								| minimus2<sup>#</sup>||94 ||4588207 ||88 ||233 ||0 ||129 ||103 ||322633 ||6.9538||209679 ||4.5169||76 ||4244 ||86379 ||27964 ||225809 ||4077 ||94 ||88183 ||107 ||68430 ||13,(6,3,4)
 |-
 | minimus2*||94 ||4588207 ||88 ||233 ||0 ||129 ||103 ||322633 ||6.9538||209679 ||4.5169||76 ||4244 ||86379 ||27964 ||225809 ||4077 ||94 ||88183 ||107 ||68430 ||13,(6,3,4)
 |}
 [#] Please note that GAA and minimus2 were designed to merge two assemblies at a time, we thus performed all ([http://sb.nhri.org.tw/CISA/en/E_coli_100_all2 runs]) and took the average scores.
 [*] Please note that the scores of minimus2 and GAA were taken from the average of ten random combinations ([http://sb.nhri.org.tw/CISA/en/Ecoli_100 details]).