Version Differences for H. volc
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(→Evaluation)
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(→Evaluation)
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| Line 60: | |||
| : [ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Haloferax_volcanii_DS2_uid46845/ NCBI] | : [ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Haloferax_volcanii_DS2_uid46845/ NCBI] | ||
| - | * '''Evaluated by Mauve Assembly Metrics to calculate the values on the columns from NumContigs to MaxContigLength''' | + | * '''Evaluated by Mauve Assembly Metrics to calculate the values for the left columns of "Blast_IntactCDS"''' |
| : [http://code.google.com/p/ngopt/wiki/How_To_Score_Genome_Assemblies_with_Mauve How to score genome assemblies using the Mauve system] | : [http://code.google.com/p/ngopt/wiki/How_To_Score_Genome_Assemblies_with_Mauve How to score genome assemblies using the Mauve system] | ||
| Line 66: | |||
| * '''Evaluated by Blast with Features''' | * '''Evaluated by Blast with Features''' | ||
| - | * '''Evaluated by GAGE to calculate the values on the columns from Units(>200) to Errors,(Indel>=5,Inv,Rel)''' | + | * '''Evaluated by GAGE to calculate the values for the right columns of "Blast_IntactCDS"''' |
| : [http://gage.cbcb.umd.edu/index.html Gage] | : [http://gage.cbcb.umd.edu/index.html Gage] | ||