Version Differences for Manual2
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(→Example)
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(→Commands and configuration)
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| Line 26: | |||
| Available commands: | Available commands: | ||
| - | ./Merge.py configuration_file | + | ./Merge.py <font color=red>myconfig</font> |
| The content of configuration file: | The content of configuration file: | ||
| Line 32: | |||
| - | count=3 | + | count=3 <font color=blue>the number of dataset you would like to merge</font> |
| - | data=assembly1.fasta,title=Contig_m1 | + | data=assembly1.fasta,title=Contig_m1 <font color=red>設定hyperlink到example file,方便直接下載</font> |
| data=assembly2.fasta,title=Contig_m2 | data=assembly2.fasta,title=Contig_m2 | ||
| data=assembly3.fasta,title=Contig_m3 | data=assembly3.fasta,title=Contig_m3 | ||
| Master_file=Contigs_m.fa | Master_file=Contigs_m.fa | ||
| min_length=100 (default:100) | min_length=100 (default:100) | ||
| - | Gap=11 | + | Gap=11 <font color=red>此行沒放在config example</font> |
| The min_length means that contig which is longer than 100 will be conserved. | The min_length means that contig which is longer than 100 will be conserved. | ||