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<ul><li><strong>Data Set:</strong></li></ul><blockquote><p>Ecoli</p></blockquote><ul><li><strong>Merge Contigs:</strong><br /></li></ul><blockquote><p>The content of the configuration file:</p></blockquote>
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{| width="699" border="1"
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| width="689" height="152" align="left" bgcolor="#66CCFF" | <blockquote><pre>count=5
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data=Abyss_contigs.fa,title=Abyss <u>''' 設定hyperlink到example file,方便直接下載'''</u>
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data=Edena_contigs.fa,title=Edena
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data=SOAPdenovo_contigs.fa,title=SOAP
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data=CLC_contigs.fa,title=CLC
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data=Velvet_contigs.fa,title=Velvet
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Master_file=Contigs.fa</pre></blockquote>
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|}<ul><li><strong>Command:</strong><br /></li></ul><blockquote><p>./Merge.py myconfig</p></blockquote><p><br /></p><ul><li><strong>Start to integrate:</strong><br /></li></ul><blockquote><p>The content of the configuration file:</p></blockquote>
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{| width="467" border="1"
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| width="457" height="152" align="left" bgcolor="#66CCFF" | <blockquote><pre>
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makeblastdb=path/makeblastdb
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blastn=path/blastn</pre></blockquote>
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|}<blockquote><p>4626205 which is the longest whole genome between different result from 5 assemblers is set into genome variable. <br /></p></blockquote><ul><li><strong>Command:</strong><br /></li></ul><p>./CISA.py myconfig</p>
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* Linux 64-bit environment |
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* Linux 64-bit environment |
