B. cereus

Revision as of 31 July 2013 02:04 by admin (Comments | Contribs)

Bacillus cereus strain ATCC_10987. The B. cereus ATCC_10987 consists of a circular chromosome of 5,224,283 bp and one plasmid of 208,369 bp in length, respectively.


Read source

The paired-end illuminia read data of B. cereus were downloaded from Gage

Sequence assembly

There are eight assemblers, ABySS, CABOG, MaSuRCA, MIRA, SGA, SOPdenovo, SPAdes 2.5, Velvet, used in the data, and the assembly results is download from SPAdes 2.5

Contig integrator

All Contigs

Evaluation

  • Benchmark genome
B. cereus ATCC_10987
  • Evaluated by Mauve Assembly Metrics to calculate the values for the left columns of "N50, Blast_IntactCDS"
How to score genome assemblies using the Mauve system (mauve_linux_snapshot_2011-08-31)