Description

Revision as of 05 May 2012 01:28 by admin (Comments | Contribs)

CISA consists of four phases for contig integration.

Four folders are generated after running CISA.

In the phase 1 (CISA1):

  • The representative contigs and their explained contigs are recorded in the file of Explained.txt.
  • Information about contig extensions are recorded in the file of Extend_info.
For example,
Head: >Skeleton contig >Extended contig
Tail: >Skeleton contig >Extended contig
  • The processed contigs named R1_contigs.fa is placed outside the CISA1 folder.