Ecoli

Revision as of 01 December 2011 20:09 by admin (Comments | Contribs)

Eshcherichia coli K12 MG1655


Read source

SRA download

Sequence assembly

  • Set1
Software Version Parameters
ABySS 1.3.0 k=31
Velvet 1.1.04 k=29 ins_length=215 cov_cutoff=12 exp_cov=24 min_contig_lgth=100 scaffolding=no
Edena 3 m=30
SOAPdenovo 1.05 K=29 M=3
CLC 4.7.2 insert_size_range=194,236 minimum_contig_length=100
  • Set2
Abyss parameter Download
k=29 Abyss_k29
k=31 Abyss_k31
k=33 Abyss_k33

Contig integrator