Saureus 101 all2

Revision as of 15 September 2012 01:36 by admin (Comments | Contribs)
Name NumContigs NumRefReplicons NumAssemblyBases NumReferenceBases NumLCBs DCJ_Distance NumDCJBlocks NumSNPs NumMisCalled NumUnCalled NumGapsRef NumGapsAssembly TotalBasesMissed PercBasesMissed ExtraBases PercExtraBases MissingChromosomes ExtraContigs NumSharedBoundaries NumInterLcbBoundaries BrokenCDS IntactCDS ContigN50 ContigN90 MinContigLength MaxContigLength Blast Units(>200) N50 cor.Units cor.N50 Error,(Indel>=5,Inv,Rel)
A_E.m2.fasta 515 3 2854449 2903081 24 497 500 118 117 1 367 428 69972 2.4103 8167 0.2861 0 29 1 11 190 2503 10112 2917 121 35461 2336 499 10066 509 10066 10,(2,1,7)
A_S.m2.fasta 397 3 2854941 2903081 24 371 373 297 296 1 357 317 69065 2.379 9831 0.3444 0 38 1 11 126 2567 13726 4257 104 53213 2448 363 13726 375 13321 10,(4,1,5)
A_V.m2.fasta 366 3 2860815 2903081 38 363 365 274 273 1 346 303 76398 2.6316 18118 0.6333 0 26 1 14 127 2566 15011 4524 102 54747 2462 329 15011 346 14746 17,(7,5,5)
E_A.m2.fasta 518 3 2859069 2903081 23 500 503 128 127 1 373 433 69831 2.4054 12798 0.4476 0 28 1 11 193 2500 10107 2917 121 35461 2336 502 10066 511 10066 10,(2,1,7)
E_S.m2.fasta 455 3 2871820 2903081 9 432 434 177 176 1 406 361 64401 2.2184 16572 0.5771 0 28 1 3 144 2549 10982 3585 127 52790 2413 440 10982 444 10953 7,(2,0,5)
E_V.m2.fasta 388 3 2876739 2903081 24 374 378 321 320 1 325 336 64801 2.2321 21625 0.7517 0 28 1 7 124 2569 13310 3911 127 54726 2446 376 13310 393 13005 18,(7,4,7)
S_A.m2.fasta 405 3 2858992 2903081 24 374 375 128 127 1 352 308 72905 2.5113 12607 0.441 0 42 1 13 126 2567 13484 4327 104 53213 2446 367 13484 378 13321 9,(3,0,6)
S_E.m2.fasta 453 3 2870902 2903081 12 429 431 189 188 1 406 357 65504 2.2564 16228 0.5653 0 30 1 5 147 2546 10982 3585 127 52790 2411 438 10982 442 10953 6,(2,0,4)
S_V.m2.fasta 418 3 2852937 2903081 15 379 380 143 142 1 373 335 79576 2.7411 17438 0.6112 0 44 1 10 138 2555 13753 4331 104 54766 2429 379 13753 392 13317 17,(8,4,5)
V_A.m2.fasta 356 3 2870916 2903081 23 344 346 339 338 1 328 290 65892 2.2697 17299 0.6026 0 26 1 8 124 2569 16840 4553 102 54747 2482 322 16840 338 15660 20,(7,5,8)
V_E.m2.fasta 387 3 2874341 2903081 22 364 367 229 228 1 315 327 65774 2.2657 18885 0.657 0 33 1 10 124 2569 13398 4062 127 54726 2447 374 13398 390 13005 19,(7,4,8)
V_S.m2.fasta 391 3 2851783 2903081 25 363 364 139 138 1 354 318 79432 2.7361 16040 0.5625 0 38 1 15 135 2558 14883 4444 104 54766 2444 360 14883 375 14286 17,(8,4,5)
A_E.gaa.fa.fas 667 3 2864202 2903081 14 578 578 211 207 4 426 493 68933 2.3745 9605 0.3353 0 97 1 7 206 2487 9223 2509 100 35461 2309 548 9154 554 9115 7,(2,0,5)
A_S.gaa.fa.fas 681 3 2870009 2903081 17 588 589 148 142 6 464 488 66966 2.3067 13688 0.4769 0 101 1 9 213 2480 9229 2542 100 35460 2313 548 9154 556 9115 8,(2,0,6)
A_V.gaa.fa.fas 667 3 2867252 2903081 14 584 585 163 157 6 452 497 67349 2.3199 12645 0.441 0 89 1 8 212 2481 9229 2523 100 35459 2314 548 9216 556 9115 9,(2,1,6)
E_A.gaa.fa.fas 3307 3 2580131 2903081 6 3137 3139 331 329 2 2943 3027 374365 12.8954 17298 0.6704 0 173 1 2 780 1913 1265 363 100 8680 1066 2681 1095 2680 1094 6,(2,0,4)
E_S.gaa.fa.fas 3305 3 2579087 2903081 6 3133 3135 300 299 1 2948 3026 376278 12.9613 17107 0.6633 0 175 1 2 782 1911 1265 363 100 8682 1065 2686 1091 2686 1090 4,(1,0,3)
E_V.gaa.fa.fas 3293 3 2571324 2903081 6 3135 3137 258 257 1 2945 3030 381203 13.131 16884 0.6566 0 161 1 2 782 1911 1266 363 100 8708 1061 2683 1086 2682 1085 5,(1,0,4)
S_A.gaa.fa.fas 676 3 2882281 2903081 3 516 517 115 113 2 482 432 67764 2.3342 13224 0.4588 0 161 1 2 155 2538 9626 3061 100 47607 2374 509 9626 509 9626 3,(2,0,1)
S_E.gaa.fa.fas 676 3 2880039 2903081 3 514 515 77 76 1 477 433 68261 2.3513 13610 0.4726 0 163 1 2 152 2541 9697 3047 100 47739 2364 509 9697 511 9697 3,(2,0,1)
S_V.gaa.fa.fas 677 3 2877349 2903081 3 529 530 126 125 1 500 462 67656 2.3305 12545 0.436 0 149 1 2 159 2534 9626 3133 100 47607 2363 509 9626 511 9626 3,(2,0,1)
V_A.gaa.fa.fas 484 3 2873624 2903081 17 413 413 245 228 17 393 353 61932 2.1333 10100 0.3515 0 81 1 8 140 2553 13398 4000 101 54747 2455 386 13398 397 13138 18,(9,4,5)
V_E.gaa.fa.fas 504 3 2866775 2903081 20 430 431 238 222 16 373 383 64084 2.2074 8999 0.3139 0 86 1 8 133 2560 12962 3789 101 54726 2433 405 12685 422 12217 19,(10,4,5)
V_S.gaa.fa.fas 510 3 2867597 2903081 16 438 438 150 133 17 421 383 64380 2.2176 10117 0.3528 0 81 1 8 148 2545 13045 3811 100 54766 2426 403 12685 420 12217 19,(10,4,5)