Saureus 35 all2

Revision as of 26 February 2013 01:36 by admin (Comments | Contribs)
Name NumContigs NumRefReplicons NumAssemblyBases NumReferenceBases NumLCBs DCJ_Distance NumDCJBlocks NumSNPs NumMisCalled NumUnCalled NumGapsRef NumGapsAssembly TotalBasesMissed PercBasesMissed ExtraBases PercExtraBases MissingChromosomes ExtraContigs NumSharedBoundaries NumInterLcbBoundaries BrokenCDS IntactCDS ContigN50 ContigN90 MinContigLength MaxContigLength !N50 Blast Units(>200) N50 cor.Units cor.N50 Error,(Indel>=5,Inv,Rel)
A_E.m2.fasta 667 2 2762382 2841116 4 653 655 18 18 0 574 468 92048 3.2399 6469 0.2342 0 14 1 2 123 2528 10119 2225 105 42009 10225 2420 569 10009 571 9973 2,(0,0,2)
A_S.m2.fasta 697 2 2775030 2841116 7 682 684 62 62 0 648 406 84585 2.9772 7622 0.2747 0 17 1 3 126 2525 9423 2182 104 32720 9580 2421 604 9342 606 9342 2,(0,0,2)
A_V.m2.fasta 845 2 2772482 2841116 4 823 825 61 61 0 782 571 93028 3.2743 10372 0.3741 0 22 1 2 154 2497 8584 1846 100 32722 8608 2377 691 8424 693 8415 2,(0,0,2)
E_A.m2.fasta 667 2 2763167 2841116 4 652 654 22 22 0 574 468 92035 3.2394 7239 0.262 0 15 1 2 122 2529 10119 2233 105 42009 10225 2421 569 10009 571 9973 2,(0,0,2)
E_S.m2.fasta 634 2 2769005 2841116 6 622 624 57 57 0 581 426 85894 3.0232 7220 0.2607 0 12 1 3 111 2540 9770 2300 105 40391 9822 2428 562 9428 564 9428 2,(0,0,2)
E_V.m2.fasta 716 2 2765903 2841116 4 701 703 31 31 0 653 536 92995 3.2732 9991 0.3612 0 16 1 1 142 2509 9030 2039 105 40391 9061 2400 615 8780 617 8776 2,(0,0,2)
S_A.m2.fasta 697 2 2775029 2841116 10 682 684 67 67 0 642 406 80819 2.8446 7539 0.2717 0 18 1 5 120 2531 9423 2182 104 32720 9580 2421 604 9342 606 9342 2,(0,0,2)
S_E.m2.fasta 635 2 2769186 2841116 9 624 626 46 46 0 583 429 86112 3.0309 7199 0.26 0 15 1 3 112 2539 9770 2300 105 40391 9823 2428 562 9428 564 9428 2,(0,0,2)
S_V.m2.fasta 874 2 2777372 2841116 9 858 860 68 68 0 814 622 83103 2.925 11879 0.4277 0 19 1 4 159 2492 6721 1690 103 26969 6742 2361 756 6636 758 6624 3,(0,0,3)
V_A.m2.fasta 845 2 2772484 2841116 4 823 825 47 47 0 780 570 86518 3.0452 10138 0.3657 0 22 1 2 155 2496 8584 1846 100 32722 8608 2377 691 8424 693 8415 2,(0,0,2)
V_E.m2.fasta 716 2 2765120 2841116 4 701 703 35 35 0 652 535 92690 3.2625 9232 0.3339 0 16 1 1 141 2510 9030 2033 105 40391 9061 2399 615 8780 617 8776 2,(0,0,2)
V_S.m2.fasta 874 2 2777373 2841116 11 860 862 67 67 0 815 627 83024 2.9222 11898 0.4284 0 19 1 4 159 2492 6721 1690 103 26969 6742 2361 756 6636 758 6624 2,(0,0,2)
A_E.gaa.fa.fas 956 2 2780500 2841116 4 902 904 126 126 0 796 618 82917 2.9185 10062 0.3619 0 54 1 2 171 2480 7793 1593 100 32726 7814 2340 736 7511 738 7467 2,(0,0,2)
A_S.gaa.fa.fas 962 2 2786249 2841116 4 886 888 92 92 0 816 572 81100 2.8545 10938 0.3926 0 76 1 2 169 2482 7747 1589 100 32720 7793 2348 736 7474 738 7467 3,(0,0,3)
A_V.gaa.fa.fas 940 2 2777413 2841116 4 897 899 39 39 0 838 631 85879 3.0227 11485 0.4135 0 43 1 2 172 2479 7796 1635 100 32722 7818 2343 737 7474 739 7467 2,(0,0,2)
E_A.gaa.fa.fas 974 2 2775165 2841116 4 916 918 41 41 0 742 654 84985 2.9913 8551 0.3081 0 58 1 2 183 2468 6936 1644 100 37100 6965 2304 762 6785 764 6785 2,(0,0,2)
E_S.gaa.fa.fas 987 2 2786291 2841116 4 900 902 39 39 0 782 610 81661 2.8743 11890 0.4267 0 87 1 2 183 2468 6830 1642 100 37109 6936 2318 764 6792 765 6792 2,(0,0,2)
E_V.gaa.fa.fas 981 2 2779621 2841116 4 922 924 70 70 0 796 667 83629 2.9435 11261 0.4051 0 60 1 1 188 2463 6936 1644 100 37109 6969 2314 765 6803 767 6803 2,(0,0,2)
S_A.gaa.fa.fas 947 2 2786157 2841116 9 902 904 49 49 0 843 570 78299 2.7559 12281 0.4408 0 48 1 4 166 2485 6386 1633 100 26967 6427 2349 780 6360 782 6348 3,(0,0,3)
S_E.gaa.fa.fas 953 2 2788709 2841116 9 905 907 45 45 0 839 594 76953 2.7085 13025 0.4671 0 52 1 3 167 2484 6398 1614 100 26967 6427 2348 780 6360 782 6355 3,(0,0,3)
S_V.gaa.fa.fas 948 2 2783925 2841116 9 916 918 46 46 0 854 655 79208 2.7879 12828 0.4608 0 35 1 4 164 2487 6386 1605 100 26969 6440 2350 780 6360 782 6348 3,(0,0,3)
V_A.gaa.fa.fas 1164 2 2781207 2841116 4 1114 1116 179 179 0 1006 841 87098 3.0656 15583 0.5603 0 50 1 2 229 2422 5337 1323 100 22892 5348 2239 941 5312 943 5312 2,(0,0,2)
V_E.gaa.fa.fas 1178 2 2786482 2841116 4 1123 1125 95 95 0 1005 874 83921 2.9538 16628 0.5967 0 56 1 1 229 2422 5335 1319 100 22892 5337 2240 941 5322 943 5322 2,(0,0,2)
V_S.gaa.fa.fas 1187 2 2788297 2841116 4 1119 1121 80 80 0 1005 838 83035 2.9226 15852 0.5685 0 68 1 2 227 2424 5334 1320 100 22892 5337 2246 943 5315 945 5315 2,(0,0,2)