Saureus 101

Revision as of 14 September 2012 18:36 by admin (Comments | Contribs) n
Name NumContigs NumRefReplicons NumAssemblyBases NumReferenceBases NumLCBs DCJ_Distance NumDCJBlocks NumSNPs NumMisCalled NumUnCalled NumGapsRef NumGapsAssembly TotalBasesMissed PercBasesMissed ExtraBases PercExtraBases MissingChromosomes ExtraContigs NumSharedBoundaries NumInterLcbBoundaries BrokenCDS IntactCDS ContigN50 ContigN90 MinContigLength MaxContigLength blast Units(>200) N50 cor.Units cor.N50 Error,(Indel>=5,Inv,Rel)
A_E_V_S_m2.fasta 307 3 2846731 2903081 34 306 310 227 226 1 307 267 93940 3.2359 19688 0.6916 0 16 1 16 118 2575 16024 5100 127 54766 2453 303 15671 322 14883 18,(4,5,9)
E_V_S_A_m2.fasta 300 3 2826976 2903081 37 305 309 335 334 1 315 279 101453 3.4947 17823 0.6305 0 11 1 18 111 2582 17534 5183 127 54766 2451 296 17190 317 15386 22,(7,5,10)
E_S_V_A_m2.fasta 309 3 2850096 2903081 28 306 311 376 375 1 317 281 89663 3.0885 19820 0.6954 0 15 1 12 115 2578 15386 5151 127 54766 2465 305 15386 325 14915 20,(4,7,9)
E_V_A_S_m2.fasta 301 3 2856931 2903081 22 294 297 297 296 1 308 269 94647 3.2602 29993 1.0498 0 15 1 12 110 2583 17190 5100 127 54766 2470 298 17019 316 15671 20,(7,5,8)
S_V_E_A_m2.fasta 310 3 2855782 2903081 22 304 308 200 199 1 313 273 88389 3.0447 23602 0.8265 0 13 1 12 118 2575 15386 5100 127 54766 2468 305 15386 327 14915 24,(8,9,7)
S_A_V_E_m2.fasta 308 3 2843844 2903081 35 311 315 225 224 1 310 280 93937 3.2358 26169 0.9202 0 12 1 17 116 2577 16024 4930 127 54766 2460 303 15904 325 14940 20,(4,6,10)
S_E_A_V_m2.fasta 307 3 2859928 2903081 24 306 310 437 436 1 308 275 85893 2.9587 25821 0.9029 0 14 1 8 117 2576 15386 5194 127 54766 2468 304 15386 323 14940 22,(4,7,11)
V_A_S_E_m2.fasta 294 3 2880241 2903081 28 299 302 220 219 1 297 262 91357 3.1469 62517 2.1705 0 13 1 15 111 2582 17499 5100 127 54766 2486 291 17499 309 16540 18,(5,6,7)
V_E_A_S_m2.fasta 296 3 2850059 2903081 30 293 297 223 222 1 302 268 97697 3.3653 24431 0.8572 0 15 1 15 111 2582 17499 5100 127 54766 2469 293 17448 314 16540 22,(7,5,10)
V_S_E_A_m2.fasta 292 3 2856741 2903081 30 293 298 225 224 1 302 265 68870 2.3723 12529 0.4386 0 12 1 13 115 2578 17843 5213 127 54766 2488 288 17843 316 16547 29,(8,11,10)
A_S_E_V_gaa.fas 686 3 2884802 2903081 14 573 573 194 190 4 461 492 63385 2.1834 20495 0.7104 0 121 1 7 206 2487 9216 2526 100 35461 2320 548 9216 557 9115 10,(2,1,7)
A_V_E_S_gaa.fas 677 3 2883850 2903081 14 578 578 280 276 4 463 500 62793 2.163 20830 0.7223 0 107 1 7 209 2484 9216 2526 100 35461 2320 548 9216 557 9115 10,(2,1,7)
A_E_V_S_gaa.fas 681 3 2884496 2903081 14 578 578 281 277 4 463 500 62774 2.1623 20863 0.7233 0 111 1 7 209 2484 9216 2526 100 35461 2320 548 9216 557 9115 10,(2,1,7)
E_A_V_S_gaa.fas 3311 3 2592748 2903081 6 3122 3124 273 271 2 2919 3015 368641 12.6983 18510 0.7139 0 192 1 2 780 1913 1266 367 100 8709 1072 2684 1099 2684 1098 6,(2,0,4)
E_V_S_A_gaa.fas 3313 3 2593803 2903081 6 3129 3131 460 458 2 2934 3027 367628 12.6634 18919 0.7294 0 187 1 2 780 1913 1265 367 100 8709 1072 2686 1099 2685 1098 5,(2,0,3)
S_E_A_V_gaa.fas 680 3 2891862 2903081 3 512 513 101 99 2 489 454 64686 2.2282 18222 0.6301 0 169 1 2 155 2538 9697 3047 100 47739 2378 509 9697 509 9697 3,(2,0,1)
S_V_A_E_gaa.fas 678 3 2892179 2903081 3 510 511 98 96 2 488 451 65219 2.2465 18841 0.6514 0 169 1 2 154 2539 9697 3047 100 47739 2378 509 9697 509 9697 3,(2,0,1)
V_S_A_E_gaa.fas 494 3 2881938 2903081 16 407 407 204 186 18 395 365 59571 2.052 13064 0.4533 0 96 1 8 142 2551 13398 3911 100 54766 2458 385 13398 398 13138 18,(9,4,5)
V_A_E_S_gaa.fas 494 3 2882993 2903081 16 406 406 165 147 18 394 359 59391 2.0458 12250 0.4249 0 97 1 8 140 2553 13398 3911 100 54766 2458 385 13398 395 13138 17,(9,4,4)
V_A_S_E_gaa.fas 494 3 2882007 2903081 16 408 408 212 194 18 396 364 59268 2.0416 13172 0.457 0 95 1 8 141 2552 13398 3911 100 54766 2458 385 13398 396 13138 18,(9,4,5)