Version Differences for Metabolic Models

Line 122:
 
In addition to the BiGG- and SEED-based models, several published models were made by using the resource of [http://biocyc.org/ BioCyc] and [http://www.genome.jp/kegg/ KEGG]. These models can also be modified and imported into the GEMSiRV. For example, the SBML file of Haloalkaliphile Natronomonas pharaonis [http://www.ploscompbiol.org/article/fetchSingleRepresentation.action?uri=info:doi/10.1371/journal.pcbi.1000799.s003 original release] can be modified by [[TextReplacer |TextReplacer]] with the replacing rules ([[Image:RulesforKEGG.TXT]]). 
 
In addition to the BiGG- and SEED-based models, several published models were made by using the resource of [http://biocyc.org/ BioCyc] and [http://www.genome.jp/kegg/ KEGG]. These models can also be modified and imported into the GEMSiRV. For example, the SBML file of Haloalkaliphile Natronomonas pharaonis [http://www.ploscompbiol.org/article/fetchSingleRepresentation.action?uri=info:doi/10.1371/journal.pcbi.1000799.s003 original release] can be modified by [[TextReplacer |TextReplacer]] with the replacing rules ([[Image:RulesforKEGG.TXT]]). 
 
 
 
 
-
<font size=3>'''Cellular compartments'''</font> [6]  
 
 
 
 
+
<font size=3>'''Cellular compartments'''</font>  
 
 
+
Reactions and proteins need to be assigned to specific cellular compartments.  
 
{| {{table border=1}} 
 
{| {{table border=1}} 
 
| align="center" style="background:#f0f0f0;"|'''Localization''' 
 
| align="center" style="background:#f0f0f0;"|'''Localization'''