TextReplacer @Jan 20, 2011 3:52:57 PM

TextReplacer, a simple tool for unifying the information described in SBML files.

For further collecting and managing information from different SBML files, TextReplacer can simply solve the known naming issues existed in the SBML files.

For examples, the species id for metabolite D-glucose in SBML file may be "glc-D", "glc_D" or "glc_DASH_D", and "extracellular" or "extraorganism" was used to represent the same compartment of cell.

The problem make it difficult in connecting data from different data sources that do not necessarily use the same id for the same object.

Therefore, with the aid of TextReplacer, the redundant data can be reduced while importing SBML models into the Model Editor.