*'''<font size=3>Model importing and editing</font>'''
*'''<font size=3>Model importing and editing</font>'''
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Right click on <u>Model databases</u>, you can import a metabolic model in SBML/spreadsheet format as described in [[Metabolic Models]].
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Right click on <u>Model databases</u> to ''Import SBML file(.xml)'' or to ''Import spreadsheets(.xls)'', you can import a metabolic model in SBML/spreadsheet format as described in [[Metabolic Models]].
You can directly edit/update the content of the imported model.
You can directly edit/update the content of the imported model.
*'''<font size=3>Reference database creation</font>'''
*'''<font size=3>Reference database creation</font>'''
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Right click on <u>Reference databases</u>, you can import a reference database provided in [[Reference Databases]] to create your own reference database.
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Right click on <u>Reference databases</u> to ''Import database(.xls)'', you can import a reference database provided in [[Reference Databases]] to create your own reference database.
You can add the information about metabolites and reactions described in a model to the reference database by right clicking on the metabolic model.
You can add the information about metabolites and reactions described in a model to the reference database by right clicking on the metabolic model.
*'''<font size=3>Draft reconstruction generation</font>'''
*'''<font size=3>Draft reconstruction generation</font>'''
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A draft reconstruction can be generated by mapping a blank reconstruction outputed by [[GBKParser]], containing gene information only, to a reference reconstruction.
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A draft reconstruction can be generated by mapping a blank reconstruction outputed by [[GBKParser]], containing gene information only, to a reference reconstruction. You just simply right click on the blank reconstruction to<u> Draft a reconstruction</u>
GEMsME will extract the reactions whose associated orthologous genes can be mapped to the reference reconstruction once the list of orthologous-gene pairs is available.
GEMsME will extract the reactions whose associated orthologous genes can be mapped to the reference reconstruction once the list of orthologous-gene pairs is available.
