Given a user-provided list of orthologous genes, GEMSiRV will extract from the reference model of the "orthologous reaction" (i.e. reactions that are catalyzed by the protein products of orthologous genes) that conform to the gene-protein-reaction (GPR) associations defined in the reference model.
Given a user-provided list of orthologous genes, GEMSiRV will extract from the reference model of the "orthologous reaction" (i.e. reactions that are catalyzed by the protein products of orthologous genes) that conform to the gene-protein-reaction (GPR) associations defined in the reference model.
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*<font size=3>Reconstruction refinement</font> ([http://sb.nhri.org.tw/GEMSiRV/Reconstruction%20step4.html Step-by-step])
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*<font size=3>Model refinement</font> ([http://sb.nhri.org.tw/GEMSiRV/Reconstruction%20step4.html Step-by-step])
You can right click on a model to <u>Generate simulation tables</u>, so that a mathematical model including a stoichiometric matrix which describes the connectivity feature of the network as well as default systems boundaries can be generated.
You can right click on a model to <u>Generate simulation tables</u>, so that a mathematical model including a stoichiometric matrix which describes the connectivity feature of the network as well as default systems boundaries can be generated.
