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ALLPATHS-LG
E. coli
R. sphaeroides
S. pneumoniae
PBcR pipeline
Data
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pacBioToCA
runCA
wgs-8.2
SPAdes
E. coli
R. sphaeroides
S. pneumoniae
Hybrid
SSPACE-longread
Result
Non-hybrid assembly
Pacbio Data
HGAP
PBcR pipeline
wgs-8.2
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(
diff
) (
history
) 18 March 2014 00:08 . . (0) . .
File:alg d1 raw.fasta
n
(
diff
) (
history
) 18 March 2014 00:08 . . (0) . .
File:alg d1 web.fasta
n
(
diff
) (
history
) 17 March 2014 23:51 . . (-23) . .
E. coli
(
diff
) (
history
) 17 March 2014 23:49 . . (-23) . .
E. coli
(
diff
) (
history
) 17 March 2014 21:55 . . (0) . .
File:sca d5 rg8 3.fa
n
(
diff
) (
history
) 17 March 2014 21:55 . . (0) . .
File:sca d5 rg8 2.fa
n
(
diff
) (
history
) 17 March 2014 21:55 . . (0) . .
File:sca d5 rg8 1.fa
n
(
diff
) (
history
) 17 March 2014 21:55 . . (0) . .
File:sca d5 rg6 3.fa
n
(
diff
) (
history
) 17 March 2014 21:55 . . (0) . .
File:sca d5 rg6 2.fa
n
(
diff
) (
history
) 17 March 2014 21:54 . . (0) . .
File:sca d5 rg6 1.fa
n
(
diff
) (
history
) 17 March 2014 21:54 . . (0) . .
File:sca d5 rg4 3.fa
n
(
diff
) (
history
) 17 March 2014 21:54 . . (0) . .
File:sca d5 rg4 2.fa
n
(
diff
) (
history
) 17 March 2014 21:54 . . (0) . .
File:sca d5 rg4 1.fa
n
(
diff
) (
history
) 17 March 2014 21:53 . . (0) . .
File:sca d5 all.fa
n
(
diff
) (
history
) 17 March 2014 21:53 . . (+278) . .
SCA
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Performance
)
(
diff
) (
history
) 17 March 2014 21:29 . . (0) . .
File:sca d9 all.fa
n
(
diff
) (
history
) 17 March 2014 21:29 . . (+25) . .
SCA
(
→
Performance
)
(
diff
) (
history
) 15 March 2014 02:47 . . (+1) . .
R. sphaeroides
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:47 . . (+2) . .
R. sphaeroides
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:46 . . (+197) . .
R. sphaeroides
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:44 . . (+131) . .
R. sphaeroides
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:40 . . (+200) . .
E. coli
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:19 . . (+4) . .
E. coli
(
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Evaluation
)
(
diff
) (
history
) 15 March 2014 02:19 . . (+108) . .
E. coli
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:17 . . (+29) . .
E. coli
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 02:16 . . (0) . .
File:E coli web.fasta
n
(
diff
) (
history
) 15 March 2014 02:16 . . (+30) . .
E. coli
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 01:26 . . (+46) . .
SCA
(
→
Dataset 7, (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:25 . . (+44) . .
SCA
(
→
Dataset 8 (P. heparinus DSM1279, 7 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:24 . . (0) . .
File:gene phep.ncbi
n
(
diff
) (
history
) 15 March 2014 01:24 . . (+44) . .
HGAP
(
→
Dataset 8 (P. heparinus DSM2366, 7 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:22 . . (0) . .
File:gene mruber.ncbi
n
(
diff
) (
history
) 15 March 2014 01:22 . . (+19) . .
HGAP
(
→
Dataset 7 (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:20 . . (-2) . .
HGAP
(
→
Dataset 7 (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:19 . . (0) . .
HGAP
(
→
Dataset 7 (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:18 . . (+28) . .
HGAP
(
→
Dataset 7 (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:17 . . (+243) . .
HGAP
(
→
Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell)
)
(
diff
) (
history
) 15 March 2014 01:16 . . (+124) . .
HGAP
(
→
Dataset 8 (P. heparinus DSM2366, 7 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:16 . . (+121) . .
HGAP
(
→
Dataset 7 (M. ruber DSM1279, 4 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:15 . . (+183) . .
HGAP
(
→
Dataset 6 (E. coli K-12 MG1655, 8 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:14 . . (-1) . .
HGAP
(
→
Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:14 . . (+184) . .
HGAP
(
→
Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:09 . . (-1) . .
SCA
(
→
Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell)
)
(
diff
) (
history
) 15 March 2014 01:08 . . (+181) . .
SCA
(
→
Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell)
)
(
diff
) (
history
) 15 March 2014 01:08 . . (+7) . .
SCA
(
→
Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 01:07 . . (+176) . .
SCA
(
→
Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells)
)
(
diff
) (
history
) 15 March 2014 00:31 . . (+68) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 15 March 2014 00:31 . . (+68) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 15 March 2014 00:31 . . (+69) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 15 March 2014 00:31 . . (+68) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 15 March 2014 00:30 . . (+68) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 15 March 2014 00:17 . . (+140) . .
S. pneumoniae
(
→
Evaluation
)
(
diff
) (
history
) 15 March 2014 00:15 . . (+140) . .
R. sphaeroides
(
diff
) (
history
) 15 March 2014 00:13 . . (+73) . .
E. coli
(
diff
) (
history
) 15 March 2014 00:13 . . (+67) . .
E. coli
(
diff
) (
history
) 14 March 2014 21:46 . . (-1) . .
S. pneumoniae
(
→
100X coverage reads
)
(
diff
) (
history
) 14 March 2014 21:46 . . (-1) . .
S. pneumoniae
(
→
50X coverage reads
)
(
diff
) (
history
) 14 March 2014 19:45 . . (0) . .
File:hgap d9 all.fa
n
(
diff
) (
history
) 14 March 2014 19:45 . . (+27) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 19:43 . . (0) . .
File:hgap d8 rg4 3.fa
n
(
diff
) (
history
) 14 March 2014 19:43 . . (0) . .
File:hgap d8 rg4 2.fa
n
(
diff
) (
history
) 14 March 2014 19:43 . . (0) . .
File:hgap d8 rg4 1.fa
n
(
diff
) (
history
) 14 March 2014 19:43 . . (0) . .
File:hgap d8 all.fa
n
(
diff
) (
history
) 14 March 2014 19:41 . . (+114) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 19:39 . . (0) . .
File:hgap d7 all.fa
n
(
diff
) (
history
) 14 March 2014 19:39 . . (+27) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 19:37 . . (0) . .
File:hgap d6 rg6 3.fa
n
(
diff
) (
history
) 14 March 2014 19:37 . . (0) . .
File:hgap d6 rg6 2.fa
n
(
diff
) (
history
) 14 March 2014 19:37 . . (0) . .
File:hgap d6 rg6 1.fa
n
(
diff
) (
history
) 14 March 2014 19:37 . . (0) . .
File:hgap d6 rg4 3.fa
n
(
diff
) (
history
) 14 March 2014 19:36 . . (0) . .
File:hgap d6 rg4 2.fa
n
(
diff
) (
history
) 14 March 2014 19:36 . . (0) . .
File:hgap d6 rg4 1.fa
n
(
diff
) (
history
) 14 March 2014 19:36 . . (0) . .
File:hgap d6 all.fa
n
(
diff
) (
history
) 14 March 2014 19:35 . . (+201) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 03:21 . . (0) . .
File:hgap d5 rg8 3.fa
n
(
diff
) (
history
) 14 March 2014 03:21 . . (0) . .
File:hgap d5 rg8 2.fa
n
(
diff
) (
history
) 14 March 2014 03:21 . . (0) . .
File:hgap d5 rg8 1.fa
n
(
diff
) (
history
) 14 March 2014 03:20 . . (0) . .
File:hgap d5 rg6 3.fa
n
(
diff
) (
history
) 14 March 2014 03:20 . . (0) . .
File:hgap d5 rg6 2.fa
n
(
diff
) (
history
) 14 March 2014 03:20 . . (0) . .
File:hgap d5 rg6 1.fa
n
(
diff
) (
history
) 14 March 2014 03:20 . . (0) . .
File:hgap d5 rg4 3.fa
n
(
diff
) (
history
) 14 March 2014 03:19 . . (0) . .
File:hgap d5 rg4 2.fa
n
(
diff
) (
history
) 14 March 2014 03:19 . . (0) . .
File:hgap d5 rg4 1.fa
n
(
diff
) (
history
) 14 March 2014 03:14 . . (0) . .
File:allpaths d3 nopac summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:14 . . (0) . .
File:allpaths d3 summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:14 . . (+154) . .
S. pneumoniae
(
diff
) (
history
) 14 March 2014 03:14 . . (0) . .
File:allpaths d2 nopac summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:13 . . (0) . .
File:allpaths d2 summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:13 . . (+154) . .
R. sphaeroides
(
diff
) (
history
) 14 March 2014 03:13 . . (+232) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 03:12 . . (0) . .
File:allpaths d1 nopac summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:12 . . (0) . .
File:allpaths d1 summary.pdf
n
(
diff
) (
history
) 14 March 2014 03:12 . . (+154) . .
E. coli
(
diff
) (
history
) 14 March 2014 03:08 . . (+29) . .
HGAP
(
→
Postprocess by discarding lower-case bases
)
(
diff
) (
history
) 14 March 2014 02:59 . . (-1) . .
HGAP
(
→
Assembly
)
(
diff
) (
history
) 14 March 2014 02:50 . . (0) . .
File:SCA D9.pdf
n
(
diff
) (
history
) 14 March 2014 02:49 . . (0) . .
SCA
(
→
Performance
)
(
diff
) (
history
) 14 March 2014 02:49 . . (+24) . .
SCA
(
→
Performance
)
(
diff
) (
history
) 14 March 2014 02:41 . . (0) . .
File:SCA D5.pdf
n
(
diff
) (
history
) 14 March 2014 02:40 . . (+24) . .
SCA
(
→
Performance
)
