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ALLPATHS-LG
E. coli
R. sphaeroides
S. pneumoniae
PBcR pipeline
Data
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pacBioToCA
runCA
wgs-8.2
SPAdes
E. coli
R. sphaeroides
S. pneumoniae
Hybrid
SSPACE-longread
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Non-hybrid assembly
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PBcR pipeline
wgs-8.2
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(
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) 18 August 2014 21:41 . . (+65) . .
SPAdes - D1 and D5
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Evaluation
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(
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) 18 August 2014 21:41 . . (+59) . .
SPAdes - D1 and D5
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Evaluation
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(
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) 18 August 2014 21:39 . . (+14) . .
RunCA
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Evaluation
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(
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) 18 August 2014 21:38 . . (+28) . .
PacBioToCA
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Evaluation
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(
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) 18 August 2014 21:37 . . (+42) . .
Read Depths
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Evaluation
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(
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) 18 August 2014 21:36 . . (+14) . .
Read Depths
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(
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) 18 August 2014 21:35 . . (0) . .
S. pneumoniae
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Evaluation
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(
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) 18 August 2014 21:35 . . (0) . .
R. sphaeroides
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Evaluation
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(
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) 18 August 2014 21:32 . . (0) . .
E. coli
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Evaluation
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(
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) 18 August 2014 21:23 . . (0) . .
E. coli
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(
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) 18 August 2014 21:21 . . (0) . .
E. coli
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(
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) 16 August 2014 03:24 . . (0) . .
File:pbcr d9 all.fa
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File:pbcr d8 rg4 3.fa
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File:pbcr d8 rg4 2.fa
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File:pbcr d8 rg4 1.fa
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File:pbcr d8 all.fa
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) 16 August 2014 03:22 . . (0) . .
File:pbcr d6 rg6 3.fa
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File:pbcr d6 rg6 2.fa
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File:pbcr d6 rg6 1.fa
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File:pbcr d6 rg4 3.fa
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File:pbcr d6 rg4 2.fa
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) 16 August 2014 03:21 . . (0) . .
File:pbcr d6 rg4 1.fa
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File:pbcr d6 all.fa
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File:pbcr d5 rg8 3.fa
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File:pbcr d5 rg8 2.fa
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File:pbcr d5 rg8 1.fa
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) 16 August 2014 03:20 . . (0) . .
File:pbcr d5 rg6 3.fa
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File:pbcr d5 rg6 2.fa
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File:pbcr d5 rg6 1.fa
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File:pbcr d5 rg4 3.fa
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File:pbcr d5 rg4 2.fa
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) 16 August 2014 03:19 . . (0) . .
File:pbcr d5 rg4 2.fa
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File:pbcr d5 rg4 1.fa
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File:pbcr d5 all.fa
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(
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) 16 August 2014 03:17 . . (0) . .
File:spd sspace p4c2.fasta
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File:spd sspace 17cell.fasta
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File:spd sspace 4cell.fasta
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File:spd sspace 3cell.fasta
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File:spd sspace 2cell.fasta
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) 16 August 2014 03:16 . . (0) . .
File:spd sspace 1cell.fasta
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(
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) 16 August 2014 03:16 . . (+198) . .
SSPACE
(
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) 16 August 2014 03:14 . . (+26) . .
SSPACE
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) 16 August 2014 03:13 . . (0) . .
File:spd hb p4c2.fasta
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File:spd hb 17cell.fasta
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File:spd hb 4cell.fasta
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File:spd hb 3cell.fasta
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File:spd hb 2cell.fasta
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File:spd hb 1cell.fasta
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(
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) 16 August 2014 03:12 . . (+174) . .
SPAdes - hybrid
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) 16 August 2014 03:10 . . (0) . .
File:spd miseq.fasta
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(
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) 16 August 2014 03:10 . . (+4) . .
SPAdes - hybrid
(
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) 16 August 2014 03:09 . . (+22) . .
SPAdes - hybrid
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(
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) 16 August 2014 03:08 . . (0) . .
File:spd d3 raw nopac.fasta
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File:spd d3 web nopac.fasta
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) 16 August 2014 03:07 . . (0) . .
File:spd d3 raw.fasta
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File:spd d3 web.fasta
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File:spd d2 raw nopac.fasta
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File:spd d2 web nopac.fasta
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File:spd d2 raw.fasta
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File:spd d2 web.fasta
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File:spd d1 raw nopac.fasta
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File:spd d1 web nopac.fasta
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File:spd d1 raw d5 single.fasta
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File:spd d1 raw.fasta
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File:spd d1 web.fasta
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(
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) 16 August 2014 02:26 . . (-3) . .
Home
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Datasets employed in this study
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(
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history
) 16 August 2014 02:21 . . (-3) . .
SPAdes - D2
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Evaluation
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(
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history
) 16 August 2014 02:16 . . (+2) . .
SPAdes - D2
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Evaluation
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(
diff
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history
) 16 August 2014 02:14 . . (+2) . .
SPAdes - D1 and D5
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Evaluation
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(
diff
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history
) 16 August 2014 02:11 . . (+1) . .
SPAdes - D1 and D5
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Evaluation
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(
diff
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history
) 16 August 2014 02:11 . . (+1) . .
SPAdes - D1 and D5
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Evaluation
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(
diff
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history
) 16 August 2014 01:41 . . (+2) . .
SPAdes - D1 and D5
(
diff
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history
) 16 August 2014 01:38 . . (-1) . .
SSPACE
(
diff
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history
) 16 August 2014 01:36 . . (0) . .
RunCA
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Evaluation
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(
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) 16 August 2014 01:36 . . (0) . .
PacBioToCA
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Evaluation
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(
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) 16 August 2014 01:36 . . (0) . .
Read Depths
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Evaluation
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(
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) 16 August 2014 01:34 . . (0) . .
RunCA
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Evaluation
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(
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) 16 August 2014 01:25 . . (0) . .
PacBioToCA
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Evaluation
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(
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) 16 August 2014 01:22 . . (0) . .
PacBioToCA
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Evaluation
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(
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) 16 August 2014 01:03 . . (+2) . .
Read Depths
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Evaluation
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(
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) 16 August 2014 00:57 . . (-2) . .
Read Depths
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(
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) 16 August 2014 00:50 . . (0) . .
Read Depths
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(
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) 16 August 2014 00:42 . . (0) . .
Read Depths
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Evaluation
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(
diff
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history
) 16 August 2014 00:29 . . (+1) . .
PBcR pipeline
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Performance
)
(
diff
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history
) 16 August 2014 00:29 . . (+4) . .
PBcR pipeline
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Performance
)
(
diff
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history
) 16 August 2014 00:29 . . (+1) . .
PBcR pipeline
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Performance
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(
diff
) (
history
) 16 August 2014 00:28 . . (+7) . .
PBcR pipeline
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Performance
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(
diff
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history
) 16 August 2014 00:28 . . (+10) . .
PBcR pipeline
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Performance
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(
diff
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history
) 16 August 2014 00:26 . . (-1) . .
PBcR pipeline
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Performance
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(
diff
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history
) 16 August 2014 00:25 . . (-12) . .
PBcR pipeline
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Performance
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(
diff
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) 16 August 2014 00:22 . . (0) . .
PBcR pipeline
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Performance
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(
diff
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history
) 16 August 2014 00:14 . . (-1) . .
PBcR pipeline
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Performance
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(
diff
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history
) 16 August 2014 00:10 . . (-6) . .
PBcR pipeline
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Performance
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(
diff
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history
) 15 August 2014 22:00 . . (-7) . .
PBcR pipeline
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Performance
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(
diff
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history
) 15 August 2014 20:13 . . (-11) . .
PBcR pipeline
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→
Self-Correction Assembly
)
(
diff
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history
) 15 August 2014 20:13 . . (+12,413) . .
PBcR pipeline
n
(
diff
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history
) 15 August 2014 20:13 . . (+10) . .
JAMWiki:Sidebar
(
diff
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history
) 15 August 2014 20:12 . . (+10) . .
JAMWiki:Sidebar
(
diff
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history
) 15 August 2014 20:09 . . (0) . .
HGAP
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Postprocess by discarding lower-case bases
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(
diff
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history
) 15 August 2014 20:08 . . (-4) . .
HGAP
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Postprocess by discarding lower-case bases
)
