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ALLPATHS-LG
E. coli
R. sphaeroides
S. pneumoniae
PBcR pipeline
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pacBioToCA
runCA
wgs-8.2
SPAdes
E. coli
R. sphaeroides
S. pneumoniae
Hybrid
SSPACE-longread
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Non-hybrid assembly
Pacbio Data
HGAP
PBcR pipeline
wgs-8.2
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File:spade hybrid.pdf
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File:spdes D3 nopac.pdf
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File:spades D3.pdf
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File:spades D2 nopac,pdf.pdf
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File:spades D2.pdf
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File:spades D1 nopac.pdf
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(
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File:spades d1.pdf
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(
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) 19 August 2014 02:35 . . (+78) . .
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(
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) 19 August 2014 02:34 . . (+6) . .
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(
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) 19 August 2014 02:33 . . (+2) . .
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(
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) 19 August 2014 02:32 . . (+2) . .
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(
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) 19 August 2014 02:32 . . (+2) . .
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(
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) 19 August 2014 02:30 . . (0) . .
HGAP
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Hierarchical genome-assembly process
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(
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) 19 August 2014 02:30 . . (+3) . .
HGAP
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Hierarchical genome-assembly process
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(
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) 19 August 2014 02:27 . . (0) . .
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(
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) 19 August 2014 02:25 . . (+78) . .
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(
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(
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) 19 August 2014 02:23 . . (+4) . .
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(
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) 19 August 2014 02:22 . . (+56) . .
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(
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) 19 August 2014 02:20 . . (+133) . .
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(
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) 19 August 2014 02:18 . . (+32) . .
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(
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(
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(
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(
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) 19 August 2014 00:20 . . (+70) . .
SSPACE
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Evaluation
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(
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) 19 August 2014 00:20 . . (+73) . .
SPAdes - hybrid
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Evaluation
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(
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) 19 August 2014 00:19 . . (+28) . .
SSPACE
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Evaluation
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(
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) 19 August 2014 00:19 . . (+6) . .
SPAdes - hybrid
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Evaluation
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(
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) 19 August 2014 00:18 . . (+28) . .
SPAdes - hybrid
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Evaluation
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(
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) 18 August 2014 22:02 . . (+21) . .
PBcR pipeline
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Dataset 8 (P. heparinus DSM1279, 7 SMRT cells)
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(
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) 18 August 2014 22:01 . . (+21) . .
PBcR pipeline
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Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell)
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(
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) 18 August 2014 22:01 . . (+21) . .
PBcR pipeline
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Dataset 7, (M. ruber DSM1279, 4 SMRT cells)
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(
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) 18 August 2014 22:01 . . (+21) . .
PBcR pipeline
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Dataset 6 (E.coli K-12 MG1655, 8 SMRT cells)
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(
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) 18 August 2014 22:00 . . (+21) . .
PBcR pipeline
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Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells)
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(
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) 18 August 2014 21:59 . . (+11) . .
HGAP
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Postprocess by discarding lower-case bases
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(
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) 18 August 2014 21:58 . . (+11) . .
HGAP
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Postprocess by discarding lower-case bases
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(
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) 18 August 2014 21:58 . . (+11) . .
HGAP
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Postprocess by discarding lower-case bases
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(
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) 18 August 2014 21:58 . . (+11) . .
HGAP
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Postprocess by discarding lower-case bases
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(
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) 18 August 2014 21:57 . . (+11) . .
HGAP
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Postprocess by discarding lower-case bases
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(
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) 18 August 2014 21:54 . . (+10) . .
SSPACE
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Evaluation
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(
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) 18 August 2014 21:52 . . (+14) . .
SSPACE
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Evaluation
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(
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) 18 August 2014 21:51 . . (+107) . .
SSPACE
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Evaluation
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(
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) 18 August 2014 21:48 . . (+60) . .
SSPACE
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Evaluation
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(
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) 18 August 2014 21:47 . . (+8) . .
SPAdes - hybrid
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Evaluation
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(
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) 18 August 2014 21:46 . . (+124) . .
SPAdes - hybrid
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Evaluation
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(
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) 18 August 2014 21:43 . . (+58) . .
SPAdes - hybrid
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Evaluation
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(
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) 18 August 2014 21:43 . . (+126) . .
SPAdes - D3
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Evaluation
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(
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) 18 August 2014 21:42 . . (+126) . .
SPAdes - D2
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Evaluation
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