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ALLPATHS-LG
E. coli
R. sphaeroides
S. pneumoniae
PBcR pipeline
Data
Read Depths
pacBioToCA
runCA
wgs-8.2
SPAdes
E. coli
R. sphaeroides
S. pneumoniae
Hybrid
SSPACE-longread
Result
Non-hybrid assembly
Pacbio Data
HGAP
PBcR pipeline
wgs-8.2
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SPAdes - hybrid
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SPAdes - hybrid
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File:spd d3 raw nopac.fasta
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File:spd d3 raw.fasta
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File:spd d2 raw nopac.fasta
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File:spd d1 raw nopac.fasta
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File:spd d1 raw d5 single.fasta
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File:spd d1 raw.fasta
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File:spd d1 web.fasta
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(
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) 16 August 2014 02:21 . . (-3) . .
SPAdes - D2
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) 16 August 2014 02:16 . . (+2) . .
SPAdes - D2
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) 16 August 2014 02:14 . . (+2) . .
SPAdes - D1 and D5
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) 16 August 2014 02:11 . . (+1) . .
SPAdes - D1 and D5
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SPAdes - D1 and D5
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) 16 August 2014 01:41 . . (+2) . .
SPAdes - D1 and D5
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SSPACE
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RunCA
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PacBioToCA
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Read Depths
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RunCA
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PacBioToCA
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PacBioToCA
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Read Depths
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Read Depths
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Read Depths
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Read Depths
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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(
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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PBcR pipeline
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(
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PBcR pipeline
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(
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PBcR pipeline
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Self-Correction Assembly
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(
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PBcR pipeline
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JAMWiki:Sidebar
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JAMWiki:Sidebar
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HGAP
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Postprocess by discarding lower-case bases
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) 15 August 2014 20:08 . . (-4) . .
HGAP
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Postprocess by discarding lower-case bases
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