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We downloaded Illumina data and pacbio data from [ftp://ftp.broadinstitute.org/pub/papers/assembly/Ribeiro2012/data/ecoli_data_alt.tar.gz ALLPATHS-LG website] <br>
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The Illumina and pacbio data were downloaded from [ftp://ftp.broadinstitute.org/pub/papers/assembly/Ribeiro2012/data/ecoli_data_alt.tar.gz ALLPATHS-LG website] <br>
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We downloaded the raw data of website data from Sequence Read Archive (SRA)
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The raw data of website data from Sequence Read Archive (SRA)
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We randomly selected the same fraction as website data from raw data by prepare.sh.
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PrepareAllPathsInputs.pl\ |
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PrepareAllPathsInputs.pl\ |
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DATA_DIR=$PWD/test.genome/data\ |
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DATA_DIR=$PWD/test.genome/data\ |