Version Differences for ALLPATHS-LG Data
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(→Self-fraction data)
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(→100X)
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| Line 167: | |||
| We randomly selected 100X coverage data from fragment library of raw data by prepare.sh. | We randomly selected 100X coverage data from fragment library of raw data by prepare.sh. | ||
| - | Fraction = 100/443.12 = 0.226 <br> | + | Fragment library fraction = 100/475.12 = 0.21 <br> |
| PrepareAllPathsInputs.pl\ | PrepareAllPathsInputs.pl\ | ||
| DATA_DIR=$PWD/test.genome/data\ | DATA_DIR=$PWD/test.genome/data\ | ||
| PLOIDY=1\ | PLOIDY=1\ | ||
| - | FRAG_FRAC=0.226\ | + | FRAG_FRAC=0.21\ |
| + | JUMP_FRAC=0.558\ | ||
| IN_GROUPS_CSV=in_groups.csv\ | IN_GROUPS_CSV=in_groups.csv\ | ||
| IN_LIBS_CSV=in_libs.csv\ | IN_LIBS_CSV=in_libs.csv\ | ||