Version Differences for ALLPATHS-LG Data
|
(→100X)
|
(→100X fragment reads)
|
| Line 178: | |||
| OVERWRITE=True\ | OVERWRITE=True\ | ||
| | tee prepare.out | | tee prepare.out | ||
| + | We also use another setting with all jumping library reads. | ||
| + | PrepareAllPathsInputs.pl\ | ||
| + | DATA_DIR=$PWD/test.genome/data\ | ||
| + | PLOIDY=1\ | ||
| + | FRAG_FRAC=0.21\ | ||
| + | IN_GROUPS_CSV=in_groups.csv\ | ||
| + | IN_LIBS_CSV=in_libs.csv\ | ||
| + | OVERWRITE=True\ | ||
| + | | tee prepare.out | ||