| Line 112: |
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| align="left" style="background:#f0f0f0;"|[[Media: allpaths_d1.pdf | '''Misassemblies''']] |
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| align="left" style="background:#f0f0f0;"|[[Media: allpaths_d1.pdf | '''Misassemblies''']] |
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| - |
| # misassemblies||1||5||1||1||1
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+ |
| # misassemblies||0||5||0||0||0
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|- |
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|- |
| - |
|Misassembled contigs length ||4638970||4625005||4638970||4638970||4638970
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+ |
|Misassembled contigs length ||0||4625005||0||0||0
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
| Line 120: |
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|# mismatches per 100kbp ||0.11||1.06||0.06||0.09||0.06 |
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|# mismatches per 100kbp ||0.11||1.06||0.06||0.09||0.06 |
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|- |
|
|- |
| - |
|# indels per 100kbp ||0.09||0.61||0.09||0.09||0.09
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+ |
|# indels per 100kbp ||0.09||0.15||0.09||0.09||0.09
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|- |
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|# N's per 100kbp ||0||282.94||0||0.04||0 |
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|# N's per 100kbp ||0||282.94||0||0.04||0 |
| Line 128: |
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| Genome fraction (%)||99.983||99.418||99.983||99.983||99.983 |
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| Genome fraction (%)||99.983||99.418||99.983||99.983||99.983 |
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|- |
|
|- |
| - |
| Duplication ratio ||1||1.013||1||1||1
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+ |
| Duplication ratio ||1||1.009||1||1||1
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|- |
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|- |
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| # genes||4494 + 1 part||4471 + 2 part ||4494 + 1 part ||4494 + 1 part||4494 + 1 part |
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| # genes||4494 + 1 part||4471 + 2 part ||4494 + 1 part ||4494 + 1 part||4494 + 1 part |
| Line 134: |
| - |
| NGA50 || 4638970 || 2714032 || 3763133 || 4209920 || 3762305
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+ |
| NGA50 || 4638970 || 2714032 || 4638970 || 4638970 || 4638970
|
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|- |
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 42m ||2hr 35m||35m ||35m || 41m |
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 42m ||2hr 35m||35m ||35m || 41m |
| Line 170: |
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|# mismatches per 100kbp ||1.19||1.42||2.84||2.52||2.26 |
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|# mismatches per 100kbp ||1.19||1.42||2.84||2.52||2.26 |
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|- |
|
|- |
| - |
|# indels per 100kbp ||1.13||0.83||3.26||1.24||1.85
|
+ |
|# indels per 100kbp ||0.41||0.53||0.72||0.48||0.52
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|- |
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|- |
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|# N's per 100kbp ||533.22||1545.02||698.87||703.96||760.38 |
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|# N's per 100kbp ||533.22||1545.02||698.87||703.96||760.38 |
| Line 178: |
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| Genome fraction (%)||99.345||98.343||99.265||99.136||99.272 |
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| Genome fraction (%)||99.345||98.343||99.265||99.136||99.272 |
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|- |
|
|- |
| - |
| Duplication ratio ||1.012||1.016||1.021||1.008||1.008
|
+ |
| Duplication ratio ||1.005||1.016||1.021||1.008||1.008
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|- |
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| # genes||4465 + 11 part ||4395 + 31 part ||4460 + 14 part ||4451 + 13 part||4455 + 14 part |
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| # genes||4465 + 11 part ||4395 + 31 part ||4460 + 14 part ||4451 + 13 part||4455 + 14 part |
