Version Differences for E. coli
|
(→Raw data)
|
(→Raw data)
|
| Line 22: | |||
| Coverage : 133.58X <br> | Coverage : 133.58X <br> | ||
| ==Raw data== | ==Raw data== | ||
| - | The raw data of Illumina data were obtained from Sequence Read Archive ([http://www.ncbi.nlm.nih.gov/sra SRA]). | + | The raw Illumina data were obtained from Sequence Read Archive ([http://www.ncbi.nlm.nih.gov/sra SRA]). |
| '''Fragment library''' <br> | '''Fragment library''' <br> | ||
| - | Accession : [http://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR447685 SRR447685] <br> | + | Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX131033 SRR447685] <br> |
| Reads length : 101bp <br> | Reads length : 101bp <br> | ||
| Reads amount : 13457571 X2 <br> | Reads amount : 13457571 X2 <br> | ||
| Line 31: | |||
| - | Coverage : 522.1X <br> | + | Coverage : 585.9X <br> |
| '''Jumping library 1''' <br> | '''Jumping library 1''' <br> | ||
| - | Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX117481 SRX117481] <br> | + | Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX117481 SRR401827] <br> |
| '''Jumping library 2''' <br> | '''Jumping library 2''' <br> | ||
| Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX145082 SRR492488] <br> | Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX145082 SRR492488] <br> | ||
| - | '''PacBio reads'''<br> | ||
| - | Accession : [http://www.ncbi.nlm.nih.gov/sra/SRX109917 SRX109917], [http://www.ncbi.nlm.nih.gov/sra/SRX109901 SRX109901](SRR386913, SRR387092, SRR386907, SRR387035), [http://www.ncbi.nlm.nih.gov/sra/SRX109936 SRX109936] | ||
| ==Fractional data== | ==Fractional data== | ||
| We randomly selected the same fraction as website data from fragment library of raw data by prepare.sh. | We randomly selected the same fraction as website data from fragment library of raw data by prepare.sh. | ||