Version Differences for HGAP
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(→Performance)
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(→Performance)
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| Line 161: | |||
| |- | |- | ||
| - | |# contigs||16 | + | |# contigs||3 |
| |- | |- | ||
| - | |Largest contig||2 198 457 | + | |Largest contig||2 548 031 |
| |- | |- | ||
| - | |Total length||4 808 733 | + | |Total length||3 121 070 |
| |- | |- | ||
| - | |N50||1 005 770 | + | |N50||2 548 031 |
| |- | |- | ||
| | style="background:#f0f0f0;"| '''Misassemblies'''|| | | style="background:#f0f0f0;"| '''Misassemblies'''|| | ||
| Line 173: | |||
| - | |# misassemblies||19 | + | |# misassemblies||1 |
| |- | |- | ||
| - | |Misassembled contigs length ||2 939 040 | + | |Misassembled contigs length ||2 548 031 |
| |- | |- | ||
| | style="background:#f0f0f0;"| '''Mismatches'''|| | | style="background:#f0f0f0;"| '''Mismatches'''|| | ||
| Line 179: | |||
| - | |# mismatches per 100kbp||0.8 | + | |# mismatches per 100kbp||0.52 |
| |- | |- | ||
| - | |# indels per 100kbp||5.71 | + | |# indels per 100kbp||2.71 |
| |- | |- | ||
| |# N's per 100kbp ||0 | |# N's per 100kbp ||0 | ||
| Line 185: | |||
| | style="background:#f0f0f0;"| '''Genome Statistics'''|| | | style="background:#f0f0f0;"| '''Genome Statistics'''|| | ||
| |- | |- | ||
| - | |Genome fraction(%) ||100 | + | |Genome fraction(%) ||99.986 |
| |- | |- | ||
| - | |Duplication ratio ||1.037 | + | |Duplication ratio ||1.017 |
| |- | |- | ||
| |# genes ||4494+3 part | |# genes ||4494+3 part | ||