(→Discard Lower-case bases)
|
(→Discard Lower-case bases)
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Line 206: | |||
|# contigs||3 | |# contigs||3 | ||
|- | |- | ||
- | |Largest contig||2 548 031 | + | |Largest contig||2 545 501 |
|- | |- | ||
- | |Total length||3 121 070 | + | |Total length||3 115 015 |
|- | |- | ||
- | |N50||2 548 031 | + | |N50||2 545 501 |
|- | |- | ||
| style="background:#f0f0f0;"| '''Misassemblies'''|| | | style="background:#f0f0f0;"| '''Misassemblies'''|| | ||
Line 216: | |||
|# misassemblies||1 | |# misassemblies||1 | ||
|- | |- | ||
- | |Misassembled contigs length ||2 548 031 | + | |Misassembled contigs length ||2 545 501 |
|- | |- | ||
| style="background:#f0f0f0;"| '''Mismatches'''|| | | style="background:#f0f0f0;"| '''Mismatches'''|| | ||
Line 222: | |||
- | |# mismatches per 100kbp||0.52 | + | |# mismatches per 100kbp||0.42 |
|- | |- | ||
- | |# indels per 100kbp||2.71 | + | |# indels per 100kbp||2.52 |
|- | |- | ||
|# N's per 100kbp ||0 | |# N's per 100kbp ||0 | ||
Line 230: | |||
|Genome fraction(%) ||99.986 | |Genome fraction(%) ||99.986 | ||
|- | |- | ||
- | |Duplication ratio ||1.017 | + | |Duplication ratio ||1.015 |
|- | |- | ||
- | |# genes ||4494+3 part | + | |# genes ||3103+2 part |
|- | |- | ||
- | |NGA50 ||615 234 | + | |NGA50 ||1 153 096 |
- | |- | ||
- | |'''Running Time'''||18hr 19m | ||
|- | |- | ||
|} | |} |