Version Differences for HGAP
|
(→Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells))
|
(→Dataset 6 (E. coli K-12 MG1655, 8 SMRT cells))
|
| Line 157: | |||
| [[Media: HGAP_D5_all.pdf | '''Misassemblies''']] for Adobe reader. | [[Media: HGAP_D5_all.pdf | '''Misassemblies''']] for Adobe reader. | ||
| =Dataset 6 (''E. coli'' K-12 MG1655, 8 SMRT cells) = | =Dataset 6 (''E. coli'' K-12 MG1655, 8 SMRT cells) = | ||
| - | We used all SMRT cells and randomly selected four and six SMRT cells three times for each, and access the correctness by Quast. | + | We used all SMRT cells and randomly selected four and six SMRT cells three times for each, and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__MG1655_uid57779/ NC_000913]) and [[Media: Ec_gene_result.ncbi | Ec_gene_list]]. |
| ==Assembly== | ==Assembly== | ||