Version Differences for How to

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  2    2 
  web 提供，RunCA with parameters，有指定merSize=14:    web 提供，RunCA with parameters，有指定merSize=14: 
- runCA unitigger=bogart merSize=14 ovlMinLen=2000 utgErrorRate=0.015 utgGraphErrorRate=0.015 utgGraphErrorLimit=0 utgMergeErrorRate=0.03 utgMergeErrorLimit=0 -p asm -d asm asm.overCov.frg   + runCA unitigger=bogart merSize=14 ovlMinLen=2000 utgErrorRate=0.015 utgGraphErrorRate=0.015  
    + utgGraphErrorLimit=0 utgMergeErrorRate=0.03 utgMergeErrorLimit=0 -p asm -d asm asm.overCov.frg  
       
  3    3 
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  但記得將grid 設0和 sge 關掉(mark掉)    但記得將grid 設0和 sge 關掉(mark掉) 
       
- runCA -p asm -d asm -s asm.spec unitigger=bogart utgErrorRate=0.015 ovlMinLen=2000 ovlErrorRate=0.03 cgwErrorRate=0.10 cnsErrorRate=0.10 utgGraphErrorLimit=0 utgGraphErrorRate=0.015 utgMergeErrorLimit=0 utgMergeErrorRate=0.03 asm.overCov.frg   + runCA -p asm -d asm -s asm.spec unitigger=bogart utgErrorRate=0.015 ovlMinLen=2000 ovlErrorRate=0.03 cgwErrorRate=0.10 cnsErrorRate=0.10  
    + utgGraphErrorLimit=0 utgGraphErrorRate=0.015 utgMergeErrorLimit=0 utgMergeErrorRate=0.03 asm.overCov.frg