Version Differences for PBcR

| align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 3rd Set'''

|-

-

|# contigs||[[Media:pbcr_d5_all.fa | 1]]||[[Media:pbcr_d5_rg4_1.fa | 1]]||[[Media:pbcr_d5_rg4_2.fa | 1]]||[[Media:pbcr_d5_rg4_3.fa | 5]]||[[Media:pbcr_d5_rg6_1.fa | 2]]||[[Media:pbcr_d5_rg6_2.fa | 2]]||[[Media:pbcr_d5_rg6_3.fa | 1]]||[[Media:pbcr_d5_rg8_1.fa | 4]]||[[Media:pbcr_d5_rg8_2.fa | 1]]||[[Media:pbcr_d5_rg8_3.fa | 2]]

+

|# contigs||[[Media:pbcr_d5_all.fa | 1]]||[[Media:pbcr_d5_rg4_1.fa | 4]]||[[Media:pbcr_d5_rg4_2.fa | 1]]||[[Media:pbcr_d5_rg4_3.fa | 6]]||[[Media:pbcr_d5_rg6_1.fa | 1]]||[[Media:pbcr_d5_rg6_2.fa | 1]]||[[Media:pbcr_d5_rg6_3.fa | 1]]||[[Media:pbcr_d5_rg8_1.fa | 1]]||[[Media:pbcr_d5_rg8_2.fa | 1]]||[[Media:pbcr_d5_rg8_3.fa | 1]]

|-

-

|Largest contig||4 651 604||4 647 117||4 648 057||3 447 068||3 749 516||2 770 859||4 649 699||1 679 082||4 649 323||4 189 785

+

|Largest contig||4 649 007||3 622 415||4 639 778||3 100 853||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107

|-

-

|Total length||4 651 604||4 647 117||4 648 057||4 661 453||4 645 941||4 657 272||4 649 699||4 655 949||4 649 323||4 652 482

+

|Total length||4 649 007||4 638 349||4 639 778||4 660 255||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107

|-

-

|N50||4 651 604||4 647 117||4 648 057||3 447 068||3 749 516||2 770 859||4 649 699||1 159 845||4 649 323||4 189 785

+

|N50||4 649 007||3 622 415||4 639 778||3 100 853||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107

|-

| style="background:#f0f0f0;"| [[Media: SCA_D5.pdf | '''Misassemblies''']]||||||||||||||||||||

-

|# misassemblies||9||9||8||9||7||9||10||7||10||8

+

|# misassemblies||10||8||8||8||8||9||10||9||8||8

|-

-

|Misassembled contigs length ||4 651 604||4 647 117||4 648 057||3 447 068||4 645 941||4 657 272||4 649 699||2 143 406||4 649 323||4 189 785

+

|Misassembled contigs length ||4 649 007||3 622 415||4 639 778||3 858 736||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107

|-

| style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||||||||

-

|# mismatches per 100kbp||0.34||1.03||0.69||0.78||0.69||0.56||0.58||0.75||0.84||0.75

+

|# mismatches per 100kbp||0.19||0.43||0.37||0.34||0.15||0.09||0.15||0.37||0.11||0.11

|-

-

|# indels per 100kbp||0.6||7.44||5.78||5.67||1.88||2.72||1.66||1.6||1.9||2.65

+

|# indels per 100kbp||1.51||25.84||22.42||15.88||6.4||10.35||5.73||3.66||5.22||6.06

|-

-

|# N's per 100kbp ||0||0.02||0||0||0||0||0||0||0.02||0

+

|# N's per 100kbp ||0||0||0||0||0||0||0||0||0||0

|-

| style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||||||

-

|Genome fraction(%) ||100||100||100||99.949||99.956||100||100||99.959||100||99.993

+

|Genome fraction(%) ||100||99.937||99.965||100||100||100||100||100||100||100

|-

-

|Duplication ratio ||1.003||1.002||1.002||1.005||1.002||1.005||1.002||1.004||1.002||1.003

+

|Duplication ratio ||1.002||1||1||1.004||1.003||1.003||1.002||1.002||1.002||1.002

|-

-

|# genes ||4494+3 part||4494+3 part||4494+3 part||4490+5 part||4491+2 part||4495+2 part||4494+3 part||4489+6 part||4494+3 part||4493+4 part

+

|# genes ||4494+3 part||4488+8 part||4491+5 part||4492+5 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part

|-

-

|NGA50 ||2 834 925||949 217||949 242||656 513||2 796 469||1 040 965||3 026 388||949 298||3 027 267||949 289

+

|NGA50 ||3 026 391||907 173||1 097 770||880 460||3 026 223||1 252 894||3 026 257||1 257 068||2 856 688||2 856 692

|-

| style="background:#f0f0f0;"| '''Running Time'''||||||||||||||||||||

 | align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 3rd Set'''
 |-
-								|# contigs||[[Media:pbcr_d5_all.fa | 1]]||[[Media:pbcr_d5_rg4_1.fa | 1]]||[[Media:pbcr_d5_rg4_2.fa | 1]]||[[Media:pbcr_d5_rg4_3.fa | 5]]||[[Media:pbcr_d5_rg6_1.fa | 2]]||[[Media:pbcr_d5_rg6_2.fa | 2]]||[[Media:pbcr_d5_rg6_3.fa | 1]]||[[Media:pbcr_d5_rg8_1.fa | 4]]||[[Media:pbcr_d5_rg8_2.fa | 1]]||[[Media:pbcr_d5_rg8_3.fa | 2]]
+								|# contigs||[[Media:pbcr_d5_all.fa | 1]]||[[Media:pbcr_d5_rg4_1.fa | 4]]||[[Media:pbcr_d5_rg4_2.fa | 1]]||[[Media:pbcr_d5_rg4_3.fa | 6]]||[[Media:pbcr_d5_rg6_1.fa | 1]]||[[Media:pbcr_d5_rg6_2.fa | 1]]||[[Media:pbcr_d5_rg6_3.fa | 1]]||[[Media:pbcr_d5_rg8_1.fa | 1]]||[[Media:pbcr_d5_rg8_2.fa | 1]]||[[Media:pbcr_d5_rg8_3.fa | 1]]
 |-
-								|Largest contig||4 651 604||4 647 117||4 648 057||3 447 068||3 749 516||2 770 859||4 649 699||1 679 082||4 649 323||4 189 785
+								|Largest contig||4 649 007||3 622 415||4 639 778||3 100 853||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107
 |-
-								|Total length||4 651 604||4 647 117||4 648 057||4 661 453||4 645 941||4 657 272||4 649 699||4 655 949||4 649 323||4 652 482
+								|Total length||4 649 007||4 638 349||4 639 778||4 660 255||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107
 |-
-								|N50||4 651 604||4 647 117||4 648 057||3 447 068||3 749 516||2 770 859||4 649 699||1 159 845||4 649 323||4 189 785
+								|N50||4 649 007||3 622 415||4 639 778||3 100 853||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107
 |-
 | style="background:#f0f0f0;"| [[Media: SCA_D5.pdf | '''Misassemblies''']]||||||||||||||||||||
-								|# misassemblies||9||9||8||9||7||9||10||7||10||8
+								|# misassemblies||10||8||8||8||8||9||10||9||8||8
 |-
-								|Misassembled contigs length ||4 651 604||4 647 117||4 648 057||3 447 068||4 645 941||4 657 272||4 649 699||2 143 406||4 649 323||4 189 785
+								|Misassembled contigs length ||4 649 007||3 622 415||4 639 778||3 858 736||4 651 559||4 652 494||4 647 813||4 649 253||4 648 694||4 648 107
 |-
 | style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||||||||
-								|# mismatches per 100kbp||0.34||1.03||0.69||0.78||0.69||0.56||0.58||0.75||0.84||0.75
+								|# mismatches per 100kbp||0.19||0.43||0.37||0.34||0.15||0.09||0.15||0.37||0.11||0.11
 |-
-								|# indels per 100kbp||0.6||7.44||5.78||5.67||1.88||2.72||1.66||1.6||1.9||2.65
+								|# indels per 100kbp||1.51||25.84||22.42||15.88||6.4||10.35||5.73||3.66||5.22||6.06
 |-
-								|# N's per 100kbp ||0||0.02||0||0||0||0||0||0||0.02||0
+								|# N's per 100kbp ||0||0||0||0||0||0||0||0||0||0
 |-
 | style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||||||
-								|Genome fraction(%) ||100||100||100||99.949||99.956||100||100||99.959||100||99.993
+								|Genome fraction(%) ||100||99.937||99.965||100||100||100||100||100||100||100
 |-
-								|Duplication ratio ||1.003||1.002||1.002||1.005||1.002||1.005||1.002||1.004||1.002||1.003
+								|Duplication ratio ||1.002||1||1||1.004||1.003||1.003||1.002||1.002||1.002||1.002
 |-
-								|# genes ||4494+3 part||4494+3 part||4494+3 part||4490+5 part||4491+2 part||4495+2 part||4494+3 part||4489+6 part||4494+3 part||4493+4 part
+								|# genes ||4494+3 part||4488+8 part||4491+5 part||4492+5 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part||4494+3 part
 |-
-								|NGA50 ||2 834 925||949 217||949 242||656 513||2 796 469||1 040 965||3 026 388||949 298||3 027 267||949 289
+								|NGA50 ||3 026 391||907 173||1 097 770||880 460||3 026 223||1 252 894||3 026 257||1 257 068||2 856 688||2 856 692
 |-
 | style="background:#f0f0f0;"| '''Running Time'''||||||||||||||||||||