Version Differences for PBcR

|# contigs||[[Media:pbcr_d6_all.fa | 4]]||[[Media:pbcr_d6_rg4_1.fa | 52]]||[[Media:pbcr_d6_rg4_2.fa | 44]]||[[Media:pbcr_d6_rg4_3.fa | 76]]||[[Media:pbcr_d6_rg6_1.fa | 6]]||[[Media:pbcr_d6_rg6_2.fa | 6]]||[[Media:pbcr_d6_rg6_3.fa | 3]]

|-

-

|Largest contig||3161528 300351 500181 250537 2045299 2044231 3622857

+

|Largest contig||3 161 528||300 351||500 181||250 537||2 045 299||2 044 231||3 622 857

|-

-

|Total length||4662182 4441307 4483671 4298734 4637078 4631147 4635596

+

|Total length||4 662 182||4 441 307||4 483 671||4 298 734||4 637 078||4 631 147||4 635 596

|-

-

|N50||3161528 93960 113089 63438 1293638 1522515 3622857

+

|N50||3 161 528||93 960||113 089||63 438||1 293 638||1 522 515||3 622 857

|-

| style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]||||||||||||||

-

|# misassemblies||8 6 7 7 7 7 8

+

|# misassemblies||8||6||7||7||7 7||8

|-

-

|Misassembled contigs length ||3161528 678927 950772 526030 3567978 3566746 3622857

+

|Misassembled contigs length ||3 161 528||678 927||950 772||526 030||3 567 978||3 566 746||3 622 857

|-

| style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||

-

|# mismatches per 100kbp||0.32 1.56 1.63 3.36 0.37 0.19 0.35

+

|# mismatches per 100kbp||0.32||1.56||1.63||3.36||0.37||0.19||0.35

|-

-

|# indels per 100kbp||4.270 55.84 39.54 66.83 10.58 9.68 10.92

+

|# indels per 100kbp||4.27||55.84||39.54||66.83||10.58||9.68||10.92

|-

|# N's per 100kbp ||0||0||0||0||0||0||0

| style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||

|-

-

|Genome fraction(%) ||99.938 95.614 96.642 92.463 99.831 99.757 99.862

+

|Genome fraction(%) ||99.938||95.614||96.642||92.463||99.831||99.757||99.862

|-

-

|Duplication ratio ||1.005 1.001 1 1.002 1.001 1.001 1.001

+

|Duplication ratio ||1.005||1.001||1||1.002||1.001||1.001||1.001

|-

-

|# genes ||4490 + 5 part 4230 + 70 part 4293 + 65 part 4105 + 105 part 4481 + 10 part 4474 + 12 part 4487 + 6 part

+

|# genes ||4490 +5 part||4230 +70 part||4293 +65 part||4105 +105 part||4481 +10 part||4474 +12 part||4487 +6 part

|-

-

|NGA50 ||702757 89630 111935 53224 857595 857662 910332

+

|NGA50 ||702 757||89 630||111 935||53 224||857 595||857 662||910 332

|-

-

| align="left" style="background:#f0f0f0;"|''' Running Time '''||2hr 9m||28m 59s||33m 32s||32m 21s||50m 17s||38m 36s||11m22s

+

| align="left" style="background:#f0f0f0;"|''' Running Time '''||37m 36s||18m 7s||18m 27s||16m 51s||28m 57s||27m 36s||28m 25s

|}

 |# contigs||[[Media:pbcr_d6_all.fa | 4]]||[[Media:pbcr_d6_rg4_1.fa | 52]]||[[Media:pbcr_d6_rg4_2.fa | 44]]||[[Media:pbcr_d6_rg4_3.fa | 76]]||[[Media:pbcr_d6_rg6_1.fa | 6]]||[[Media:pbcr_d6_rg6_2.fa | 6]]||[[Media:pbcr_d6_rg6_3.fa | 3]]
 |-
-								|Largest contig||3161528	300351	500181	250537	2045299	2044231	3622857
+								|Largest contig||3 161 528||300 351||500 181||250 537||2 045 299||2 044 231||3 622 857
 |-
-								|Total length||4662182	4441307	4483671	4298734	4637078	4631147	4635596
+								|Total length||4 662 182||4 441 307||4 483 671||4 298 734||4 637 078||4 631 147||4 635 596
 |-
-								|N50||3161528	93960	113089	63438	1293638	1522515	3622857
+								|N50||3 161 528||93 960||113 089||63 438||1 293 638||1 522 515||3 622 857
 |-
 | style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]||||||||||||||
-								|# misassemblies||8	6	7	7	7	7	8
+								|# misassemblies||8||6||7||7||7	7||8
 |-
-								|Misassembled contigs length ||3161528	678927	950772	526030	3567978	3566746	3622857
+								|Misassembled contigs length ||3 161 528||678 927||950 772||526 030||3 567 978||3 566 746||3 622 857
 |-
 | style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||
-								|# mismatches per 100kbp||0.32	1.56	1.63	3.36	0.37	0.19	0.35
+								|# mismatches per 100kbp||0.32||1.56||1.63||3.36||0.37||0.19||0.35
 |-
-								|# indels per 100kbp||4.270	55.84	39.54	66.83	10.58	9.68	10.92
+								|# indels per 100kbp||4.27||55.84||39.54||66.83||10.58||9.68||10.92
 |-
 |# N's per 100kbp ||0||0||0||0||0||0||0
 | style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||
 |-
-								|Genome fraction(%) ||99.938	95.614	96.642	92.463	99.831	99.757	99.862
+								|Genome fraction(%) ||99.938||95.614||96.642||92.463||99.831||99.757||99.862
 |-
-								|Duplication ratio ||1.005	1.001	1	1.002	1.001	1.001	1.001
+								|Duplication ratio ||1.005||1.001||1||1.002||1.001||1.001||1.001
 |-
-								|# genes ||4490 + 5 part	4230 + 70 part	4293 + 65 part	4105 + 105 part	4481 + 10 part	4474 + 12 part	4487 + 6 part
+								|# genes ||4490 +5 part||4230 +70 part||4293 +65 part||4105 +105 part||4481 +10 part||4474 +12 part||4487 +6 part
 |-
-								|NGA50 ||702757	89630	111935	53224	857595	857662	910332
+								|NGA50 ||702 757||89 630||111 935||53 224||857 595||857 662||910 332
 |-
-								| align="left" style="background:#f0f0f0;"|''' Running Time '''||2hr 9m||28m 59s||33m 32s||32m 21s||50m 17s||38m 36s||11m22s
+								| align="left" style="background:#f0f0f0;"|''' Running Time '''||37m 36s||18m 7s||18m 27s||16m 51s||28m 57s||27m 36s||28m 25s
 |}