Version Differences for PBcR
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(→4)
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(→5)
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| Line 886: | |||
| | align="center" style="background:#f0f0f0;"|'''4 SMRT cells : 3rd Set''' | | align="center" style="background:#f0f0f0;"|'''4 SMRT cells : 3rd Set''' | ||
| |- | |- | ||
| - | |# contigs||[[Media: pbcr_d8_all.fa | 2]]||[[Media: pbcr_d8_rg4_1.fa | 16]]||[[Media: pbcr_d8_rg4_2.fa | 10]]||[[Media: pbcr_d8_rg4_3.fa | 15]] | + | |# contigs||[[Media: pbcr_d8_all.fa | 2]]||[[Media: pbcr_d8_rg4_1.fa | 14]]||[[Media: pbcr_d8_rg4_2.fa | 9]]||[[Media: pbcr_d8_rg4_3.fa | 12]] |
| |- | |- | ||
| - | |Largest contig||5163833 2233593 2243042 2214012 | + | |Largest contig||5163833||2233593||2243042||2214012 |
| |- | |- | ||
| - | |Total length|| 5163833 5156868 5169779 5159887 | + | |Total length|| 5163833||5156868||5169779||5159887 |
| |- | |- | ||
| - | |N50||5163833 1382073 1271789 13924340 | + | |N50||5163833||1382073||1271789||13924340 |
| |- | |- | ||
| | style="background:#f0f0f0;"| [[Media:sca_d8.pdf | '''Misassemblies''']]|||||||| | | style="background:#f0f0f0;"| [[Media:sca_d8.pdf | '''Misassemblies''']]|||||||| | ||
| Line 898: | |||
| |# misassemblies||1||0||1||0 | |# misassemblies||1||0||1||0 | ||
| |- | |- | ||
| - | |Misassembled contigs length ||5163833 0 2243042 0 | + | |Misassembled contigs length ||5163833||0||2243042||0 |
| |- | |- | ||
| | style="background:#f0f0f0;"| '''Mismatches'''|||||||| | | style="background:#f0f0f0;"| '''Mismatches'''|||||||| | ||
| Line 904: | |||
| - | |# mismatches per 100kbp||3.97 8.280 6.93 8.15 | + | |# mismatches per 100kbp||3.97||8.280||6.93||8.15 |
| |- | |- | ||
| - | |# indels per 100kbp||0.64 7.33 5.73 5.7 | + | |# indels per 100kbp||0.64||7.33||5.73||5.7 |
| |- | |- | ||
| - | |# N's per 100kbp ||0 0 0 0 | + | |# N's per 100kbp ||0||0||0||0 |
| |- | |- | ||
| | style="background:#f0f0f0;"| '''Genome Statistics'''|||||||| | | style="background:#f0f0f0;"| '''Genome Statistics'''|||||||| | ||
| Line 912: | |||
| - | |Genome fraction(%) ||99.945 99.756 99.98 99.775 | + | |Genome fraction(%) ||99.945||99.756||99.98||99.775 |
| |- | |- | ||
| - | |Duplication ratio ||1.001 1 1.002 1.001 | + | |Duplication ratio ||1.001||1||1.002||1.001 |
| |- | |- | ||
| - | |# genes ||4336 + 2 part 4316 + 18 part 4331 + 8 part 4320 + 15 part | + | |# genes ||4336 +2 part||4316 +18 part||4331 +8 part||4320 +15 part |
| |- | |- | ||
| - | |NGA50 ||2926354 1382073 1271789 1392434 | + | |NGA50 ||2926354||1382073||1271789||1392434 |
| |- | |- | ||
| |align="left" style="background:#f0f0f0;"|''' Running Time '''||58m||33m 10s||33m 51s||33m 36s | |align="left" style="background:#f0f0f0;"|''' Running Time '''||58m||33m 10s||33m 51s||33m 36s | ||