Version Differences for PBcR

(Performance)
(Performance)
Line 984:
  |# contigs||[[Media:pbcr_d6_all.fa | 1]]||[[Media:pbcr_d6_rg4_1.fa | 1]]||[[Media:pbcr_d6_rg4_2.fa | 1]]||[[Media:pbcr_d6_rg4_3.fa | 1]]||[[Media:pbcr_d6_rg6_1.fa | 1]]    |# contigs||[[Media:pbcr_d6_all.fa | 1]]||[[Media:pbcr_d6_rg4_1.fa | 1]]||[[Media:pbcr_d6_rg4_2.fa | 1]]||[[Media:pbcr_d6_rg4_3.fa | 1]]||[[Media:pbcr_d6_rg6_1.fa | 1]] 
  |-     |-  
- |Largest contig||3100062||3100061||3100039||3100030||3100027   + |Largest contig||4644061||4651184||4644056||4651207||4651348  
  |-    |- 
- |Total length||3100062||3100061||3100039||3100030||3100027   + |Total length||4644061||4651184||4644056||4651207||4651348  
  |-    |- 
- |N50||3100062||3100061||3100039||3100030||3100027   + |N50||4644061||4651184||4644056||4651207||4651348  
  |-    |- 
  | style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]||||||||||    | style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]|||||||||| 
Line 994:
- |# misassemblies||0||0||0||0||0   + |# misassemblies||8 8 8 8 8  
  |-    |- 
- |Misassembled contigs length ||0||0||0||0||0   + |Misassembled contigs length ||4644061||4651184||4644056||4651207||4651348  
  |-    |- 
  | style="background:#f0f0f0;"| '''Mismatches'''||||||||||    | style="background:#f0f0f0;"| '''Mismatches'''|||||||||| 
Line 1000:
- |# mismatches per 100kbp||0.03||0.03||0.03||0.03||0.13   + |# mismatches per 100kbp||0.13||0.39||0.13||0.34||0.19  
  |-    |- 
- |# indels per 100kbp||13.53||13.43||13.46||13.92||13.82   + |# indels per 100kbp||31.34||31.64||31.27||33.04||30.63  
  |-    |- 
  |# N's per 100kbp ||0||0||0||0||0    |# N's per 100kbp ||0||0||0||0||0 
Line 1006:
  | style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||    | style="background:#f0f0f0;"| '''Genome Statistics'''|||||||||| 
  |-    |- 
- |Genome fraction(%) ||99.986||99.986||99.986||99.986||99.986   + |Genome fraction(%) ||100||99.998||100||99.998||100  
  |-    |- 
- |Duplication ratio ||1.001||1.001||1.001||1.001||1.001   + |Duplication ratio ||1.001||1.003||1.001||1.003||1.003  
  |-    |- 
- |# genes ||3103 + 2part||3103 +2 part||3103 +2 part||3103 +2 part||3103 +2 part   + |# genes ||4494 + 3 part||4493 + 4 part||4494 + 3 part||4493 + 4 part||4494 +3 part  
  |-    |- 
- |NGA50 ||3100062||3100061||3100039||3100030||3100027   + |NGA50 ||3025485||960375||3025483||960380||960403  
  |-    |- 
  | align="left" style="background:#f0f0f0;"|''' Running Time '''||34m 23s||34m 5s||41m||34m 12s||43m 56s    | align="left" style="background:#f0f0f0;"|''' Running Time '''||34m 23s||34m 5s||41m||34m 12s||43m 56s