Version Differences for PBcR

(→還沒)
(→還沒)
Line 27:
  |# contigs||[[Media:f25X_d5_all_wog.fa | 1]]||[[Media:f25X_d5_rg4_1_wog.fa | 4]]||[[Media:f25X_d5_rg4_2.fa | 1]]||[[Media:f25X_d5_rg4_3_wog.fa | 6]]||[[Media:f25_d5_rg6_1_wog.fa | 1]]||[[Media:f25X_d5_rg6_2_wog.fa | 1]]||[[Media:f25X_d5_rg6_3_wog.fa | 1]]||[[Media:f25X_d5_rg8_1_wog.fa | 1]]||[[Media:f25X_d5_rg8_2_wog.fa | 1]]||[[Media:f25_d5_rg8_3_wog.fa | 1]]    |# contigs||[[Media:f25X_d5_all_wog.fa | 1]]||[[Media:f25X_d5_rg4_1_wog.fa | 4]]||[[Media:f25X_d5_rg4_2.fa | 1]]||[[Media:f25X_d5_rg4_3_wog.fa | 6]]||[[Media:f25_d5_rg6_1_wog.fa | 1]]||[[Media:f25X_d5_rg6_2_wog.fa | 1]]||[[Media:f25X_d5_rg6_3_wog.fa | 1]]||[[Media:f25X_d5_rg8_1_wog.fa | 1]]||[[Media:f25X_d5_rg8_2_wog.fa | 1]]||[[Media:f25_d5_rg8_3_wog.fa | 1]] 
  |-    |- 
- |Largest contig||4649001 3622531 4647261 3760960 4648404 4654462 4647823 4649251 4648711 4648069   + |Largest contig||4649001||3622531||4647261||3760960||4648404||4654462||4647823||4649251||4648711||4648069  
  |-    |- 
- |Total length||4649001 4638443 4647261 4661578 4648404 4654462 4647823 4649251 4648711 4648069   + |Total length||4649001||4638443||4647261||4661578||4648404||4654462||4647823||4649251||4648711||4648069  
  |-    |- 
- |N50||4649001 3622531 4647261 3760960 4648404 4654462 4647823 4649251 4648711 4648069   + |N50||4649001||3622531||4647261||3760960||4648404||4654462||4647823||4649251||4648711||4648069  
  |-    |- 
  | style="background:#f0f0f0;"| [[Media: SCA_D5.pdf | '''Misassemblies''']]||||||||||||||||||||    | style="background:#f0f0f0;"| [[Media: SCA_D5.pdf | '''Misassemblies''']]|||||||||||||||||||| 
Line 37:
- |# misassemblies||10 8 8 10 8 8 10 9 8 8   + |# misassemblies||10||8||8||10||8||8||10||9||8||8  
  |-    |- 
- |Misassembled contigs length ||4649001 3622531 4647261 3864655 4648404 4654462 4647823 4649251 4648711 4648069   + |Misassembled contigs length ||4649001||3622531||4647261||3864655||4648404||4654462||4647823||4649251||4648711||4648069  
  |-    |- 
  | style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||||||||    | style="background:#f0f0f0;"| '''Mismatches'''|||||||||||||||||||| 
Line 43:
- |# mismatches per 100kbp||0.19 0.5 0.26 0.97 0.22 0.280 0.26 0.26 0.09 0.13   + |# mismatches per 100kbp||0.19||0.5||0.26||0.97||0.22||0.280||0.26||0.26||0.09||0.13  
  |-    |- 
- |# indels per 100kbp||1.64 26.42 20.150 15.86 6.66 10.76 5.82 4.1 5.3 6.68   + |# indels per 100kbp||1.64||26.42||20.150||15.86||6.66||10.76||5.82||4.1||5.3||6.68  
  |-    |- 
  |# N's per 100kbp ||0||0||0||0||0||0||0||0||0||0    |# N's per 100kbp ||0||0||0||0||0||0||0||0||0||0 
Line 49:
  | style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||||||    | style="background:#f0f0f0;"| '''Genome Statistics'''|||||||||||||||||| 
  |-    |- 
- |Genome fraction(%) || 100 99.942 100 99.999 100 100 100 100 100 100   + |Genome fraction(%) ||100||99.942||100||99.999||100||100||100||100||100||100  
  |-    |- 
- |Duplication ratio ||1.002 1 1.002 1.006 1.002 1.003 1.002 1.002 1.002 1.002   + |Duplication ratio ||1.002||1||1.002||1.006||1.002||1.003||1.002||1.002||1.002||1.002  
  |-    |- 
- |# genes ||4494 + 3 part 4488 + 8 part 4494 + 3 part 4492 + 5 part 4494 + 3 part 4495 + 2 part 4494 + 3 part 4494 + 3 part 4494 + 3 part 4494 + 3 part   + |# genes ||4494 +3 part||4488 +8 part||4494 +3 part||4492 +5 part||4494 +3 part||4495 +2 part||4494 +3 part||4494 +3 part||4494 +3 part||4494 +3 part  
  |-    |- 
- |NGA50 ||3026385 907188 949093 880427 3026217 3026142 3026271 1257063 2856677 2856668   + |NGA50 ||3026385||907188||949093||880427||3026217||3026142||3026271||1257063||2856677||2856668  
  |-    |- 
  | align="left" style="background:#f0f0f0;"|''' Running Time '''||6hr 14m||30m 13s||39m 45s||33m 56s||1hr 5m||48m 4s||1hr 2m||1hr 22m||1hr 31m||1hr 26m    | align="left" style="background:#f0f0f0;"|''' Running Time '''||6hr 14m||30m 13s||39m 45s||33m 56s||1hr 5m||48m 4s||1hr 2m||1hr 22m||1hr 31m||1hr 26m