(→Performance)
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(→Performance)
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Line 573: | |||
|# contigs||[[Media:pbcr_d7_all_wog.fa | 1]]||[[Media:pbcr_d7_rg3_1.fa | 1]]||[[Media:pbcr_d7_rg3_2.fa | 1]]||[[Media:pbcr_d7_rg3_3.fa | 1]]||[[Media:pbcr_d7_rg3_4.fa | 1]] | |# contigs||[[Media:pbcr_d7_all_wog.fa | 1]]||[[Media:pbcr_d7_rg3_1.fa | 1]]||[[Media:pbcr_d7_rg3_2.fa | 1]]||[[Media:pbcr_d7_rg3_3.fa | 1]]||[[Media:pbcr_d7_rg3_4.fa | 1]] | ||
|- | |- | ||
- | |Largest contig||3 100 062||3 099 663||3 099 663||3 098 784||3 099 602 | + | |Largest contig||3 100 140||3 099 663||3 099 663||3 098 784||3 099 602 |
|- | |- | ||
- | |Total length||3 100 062||3 099 663||3 099 663||3 098 784||3 099 602 | + | |Total length||3 100 140||3 099 663||3 099 663||3 098 784||3 099 602 |
|- | |- | ||
- | |N50||3 100 062||3 099 663||3 099 663||3 098 784||3 099 602 | + | |N50||3 100 140||3 099 663||3 099 663||3 098 784||3 099 602 |
|- | |- | ||
| style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]|||||||||| | | style="background:#f0f0f0;"| [[Media:SCA_d6.pdf | '''Misassemblies''']]|||||||||| | ||
Line 583: | |||
- | |# misassemblies||0||0||0||0||0 | + | |# misassemblies||1||0||0||0||0 |
|- | |- | ||
- | |Misassembled contigs length ||0||0||0||0||0 | + | |Misassembled contigs length ||3 100 140||0||0||0||0 |
|- | |- | ||
| style="background:#f0f0f0;"| '''Mismatches'''|||||||||| | | style="background:#f0f0f0;"| '''Mismatches'''|||||||||| | ||
Line 589: | |||
|# mismatches per 100kbp||0.03||0.06||0.06||0.03||0.03 | |# mismatches per 100kbp||0.03||0.06||0.06||0.03||0.03 | ||
|- | |- | ||
- | |# indels per 100kbp||13.53||20.47||20.47||19.95||20.7 | + | |# indels per 100kbp||13.85||20.47||20.47||19.95||20.7 |
|- | |- | ||
|# N's per 100kbp ||0||0||0||0||0 | |# N's per 100kbp ||0||0||0||0||0 | ||
Line 599: | |||
|Duplication ratio ||1.001||1.001||1.001||1.001||1.001 | |Duplication ratio ||1.001||1.001||1.001||1.001||1.001 | ||
|- | |- | ||
- | |# genes ||3103 + 2part||3103 +2 part||3103 +2 part||3103 +2 part||3103 +2 part | + | |# genes ||3103 + 2 part||3103 +2 part||3103 +2 part||3103 +2 part||3103 +2 part |
|- | |- | ||
- | |NGA50 ||3 100 062||3 099 663||3 099 663||3 098 784||3 099 602 | + | |NGA50 ||1 707 540||3 099 663||3 099 663||3 098 784||3 099 602 |
|- | |- | ||
| align="left" style="background:#f0f0f0;"|''' Running Time '''||34m 24s||42m 32s||37m 55s||39m 37s||43m 28s | | align="left" style="background:#f0f0f0;"|''' Running Time '''||34m 24s||42m 32s||37m 55s||39m 37s||43m 28s |