Version Differences for PBcR
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(→higher coverage bias)
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(→higher coverage bias)
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| '''Coverage distribution of Dataset 6''' <br> | '''Coverage distribution of Dataset 6''' <br> | ||
| - | {| {{table}} border="1" | ||
| - | | align="center" style="background:#f0f0f0;"|'''Filtered_four.fastq (Genome size: 4.65Mb)''' | ||
| - | |- | ||
| - | | seqs amount:187921 | ||
| - | |- | ||
| - | | seq avg len:3190.512705 | ||
| - | |- | ||
| - | | total:599.56 Mb | ||
| - | |- | ||
| - | | depth: 128.94X | ||
| - | |} | ||
| [[File:d6_cov.png]] <br> | [[File:d6_cov.png]] <br> | ||
| + | {| {{table}} border="1" | ||
| + | | align="center" style="background:#f0f0f0;"|'''Filtered_four.fastq (Genome size: 4.65Mb)''' | ||
| + | |- | ||
| + | | seqs amount:187921 | ||
| + | |- | ||
| + | | seq avg len:3190.512705 | ||
| + | |- | ||
| + | | total:599.56 Mb | ||
| + | |- | ||
| + | | depth: 128.94X | ||
| + | |} | ||
| =Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)= | =Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)= | ||
| We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]]. ([http://sb.nhri.org.tw/comps/quast/Non-hybrid/PBcR_pipeline/D7/report.html more detail]) | We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]]. ([http://sb.nhri.org.tw/comps/quast/Non-hybrid/PBcR_pipeline/D7/report.html more detail]) | ||