Version Differences for PBcR

(higher coverage bias)
(higher coverage bias)
Line 572:
  [[File:d6_cov.png]] <br>    [[File:d6_cov.png]] <br> 
  {| {{table}} border="1"    {| {{table}} border="1" 
- | align="center" style="background:#f0f0f0;"|'''Filtered_four.fastq (Genome size: 4.65Mb)'''   + | align="center" style="background:#f0f0f0;"|'''Filtered_four.fastq (Genome size: 4.65Mb)'''  
- |-   + |-  
- | seqs amount:187921   + | seqs amount:187921  
- |-   + |-  
- | seq avg len:3190.512705   + | seq avg len:3190.512705  
- |-   + |-  
- | total:599.56 Mb   + | total:599.56 Mb  
- |-   + |-  
- | depth: 128.94X   + | depth: 128.94X  
- |}   + |}  
  =Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)=    =Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)= 
  We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]]. ([http://sb.nhri.org.tw/comps/quast/Non-hybrid/PBcR_pipeline/D7/report.html more detail])    We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]]. ([http://sb.nhri.org.tw/comps/quast/Non-hybrid/PBcR_pipeline/D7/report.html more detail])