Version Differences for PBcR

(→Dataset 6 (E.coli K-12 MG1655, 8 SMRT cells))
Line 7:
       
  =Dataset 5 (''E. coli'' K-12 MG1655, 17 SMRT cells)=    =Dataset 5 (''E. coli'' K-12 MG1655, 17 SMRT cells)= 
    + We used all SMRT cells and randomly selected four, six and eight SMRT cells three times for each, and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__MG1655_uid57779/ NC_000913]) and [[Media: Ec_gene_result.ncbi | Ec_gene_list]].  
       
- ==Performance==      
  PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq    PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq 
  PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq genomeSize=4650000    PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq genomeSize=4650000 
Line 16:
  PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq genomeSize=5580000    PBcR -pbCNS -length 500 -partitions 200 -l ecoli -s pacbio.spec -fastq filtered_subreads.fastq genomeSize=5580000 
       
    + ==Performance==  
  without genomeSize([http://sb.nhri.org.tw/comps/quast/Non-hybrid/wgs-8.2/D5/wogSize/report.html more detail])    without genomeSize([http://sb.nhri.org.tw/comps/quast/Non-hybrid/wgs-8.2/D5/wogSize/report.html more detail]) 
  {| {{table}} border="1"    {| {{table}} border="1"