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=Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)= |
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=Dataset 7, (''M. ruber'' DSM1279, 4 SMRT cells)= |
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We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]]. ([http://sb.nhri.org.tw/comps/quast/Non-hybrid/PBcR_pipeline/D7/report.html more detail])
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+ |
We used all SMRT cells to do assembly and evaluated the assemblies by QUAST against the reference genome ([ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Meiothermus_ruber_DSM_1279_uid46661/ NC_013946]) and [[Media:gene_mruber.ncbi | Mr_gene_list]].
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PBcR -pbCNS -length 500 -partitions 200 -l mruber -s pacbio.spec -fastq filtered_subreads.fastq |
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PBcR -pbCNS -length 500 -partitions 200 -l mruber -s pacbio.spec -fastq filtered_subreads.fastq |
