Version Differences for PBcR pipeline

(→Performance)
(→Performance)
Line 206:
  | style="background:#f0f0f0;"| [[Media:sca_d8.pdf | '''Misassemblies''']]||||||||    | style="background:#f0f0f0;"| [[Media:sca_d8.pdf | '''Misassemblies''']]|||||||| 
  |-    |- 
- |# misassemblies||1||0||0||0   + |# misassemblies||0||0||0||0  
  |-    |- 
- |Misassembled contigs length ||5 163 983||0||0||0   + |Misassembled contigs length ||0||0||0||0  
  |-    |- 
  | style="background:#f0f0f0;"| '''Mismatches'''||||||||    | style="background:#f0f0f0;"| '''Mismatches'''|||||||| 
Line 214:
  |# mismatches per 100kbp||8.41||9.960||8.27||10.29    |# mismatches per 100kbp||8.41||9.960||8.27||10.29 
  |-    |- 
- |# indels per 100kbp||2.19||21.34||13.29||14.78   + |# indels per 100kbp||2.19||18.99||13.13||14.01  
  |-    |- 
  |# N's per 100kbp ||0||0||0||0    |# N's per 100kbp ||0||0||0||0 
Line 222:
  |Genome fraction(%) ||99.919||99.864||99.907||99.89    |Genome fraction(%) ||99.919||99.864||99.907||99.89 
  |-    |- 
- |Duplication ratio ||1.001||1.001||1.002||1.002   + |Duplication ratio ||1||1||1.001||1.001  
  |-    |- 
  |# genes ||4335+3 part||4330+5 part||4333+5 part||4333+3 part    |# genes ||4335+3 part||4330+5 part||4333+5 part||4333+3 part 
Line 228:
- |NGA50 ||4 300 532||2 043 590||2 044 147||2 135 225   + |NGA50 ||5 163 983 532||2 043 590||2 044 147||2 135 225  
  |-     |-  
  | style="background:#f0f0f0;"| '''Running Time'''||||||||    | style="background:#f0f0f0;"| '''Running Time'''||||||||