| Line 69: |
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| Misassembled contigs length||987578||2460246||2026388||1623080||2824659 |
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| Misassembled contigs length||987578||2460246||2026388||1623080||2824659 |
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|- |
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|- |
| - |
| Mismatches||||||||||
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+ |
| style="background:#f0f0f0;"| Mismatches||||||||||
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| # mismatches per 100 kbp||9.61||9.4||9.120||10.17||7.09 |
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| # mismatches per 100 kbp||9.61||9.4||9.120||10.17||7.09 |
| Line 173: |
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| Misassembled contigs length||1470460||2166145||3149834 |
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| Misassembled contigs length||1470460||2166145||3149834 |
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|- |
|
|- |
| - |
| Mismatches||||||
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+ |
| style="background:#f0f0f0;"| Mismatches||||||
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|- |
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|- |
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| # mismatches per 100 kbp||7.41||5.99||6.14 |
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| # mismatches per 100 kbp||7.41||5.99||6.14 |
| Line 193: |
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|} |
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|} |
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+ |
{| {{table}} border="1"
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+ |
| align="center" style="background:#f0f0f0;"|'''Statistics without reference'''
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| |
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+ |
| align="center" style="background:#f0f0f0;"|'''2_25X_asm.ctg'''
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+ |
| align="center" style="background:#f0f0f0;"|'''3_25X_asm.ctg'''
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+ |
| align="center" style="background:#f0f0f0;"|'''4_25X_asm.ctg'''
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+ |
|-
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|
+ |
| # contigs||17||6||10
|
| |
|
+ |
|-
|
| |
|
+ |
| Largest contig||1214624||1487482||2034167
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| |
|
+ |
|-
|
| |
|
+ |
| Total length||4691318||4671508||4678847
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| |
|
+ |
|-
|
| |
|
+ |
| N50||672326||1340503||904105
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+ |
|-
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| |
|
+ |
| style="background:#f0f0f0;"| Misassemblies||||||
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| |
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+ |
|-
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| |
|
+ |
| # misassemblies||8||7||10
|
| |
|
+ |
|-
|
| |
|
+ |
| Misassembled contigs length||1424020||2055756||3075921
|
| |
|
+ |
|-
|
| |
|
+ |
| style="background:#f0f0f0;"| Mismatches||||||
|
| |
|
+ |
|-
|
| |
|
+ |
| # mismatches per 100 kbp||7.13||6.05||6.53
|
| |
|
+ |
|-
|
| |
|
+ |
| # indels per 100 kbp||1.59||0.69||2.87
|
| |
|
+ |
|-
|
| |
|
+ |
| # N's per 100 kbp||0||0.06||0
|
| |
|
+ |
|-
|
| |
|
+ |
| style="background:#f0f0f0;"| Genome statistics||||||
|
| |
|
+ |
|-
|
| |
|
+ |
| Genome fraction (%)||99.997||99.824||99.961
|
| |
|
+ |
|-
|
| |
|
+ |
| Duplication ratio||1.011||1.009||1.009
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| |
|
+ |
|-
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| |
|
+ |
| # genes||4488 + 9 part||4485 + 4 part||4491 + 4 part
|
| |
|
+ |
|-
|
| |
|
+ |
| NGA50||367128||1340503||562428
|
| |
|
+ |
|-
|
| |
|
+ |
|}
|
| |
= Summary = |
|
= Summary = |
| |
|
|
|
