Version Differences for Pacbio Data
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(→Alldata)
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(→All Data)
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| Line 19: | |||
| m120229_193409_42129_c000304212550000001500000112311380_s1_p0.bas.h5<br> | m120229_193409_42129_c000304212550000001500000112311380_s1_p0.bas.h5<br> | ||
| m120228_171636_42139_c100301722550000001523012308061205_s1_p0.bas.h5<br> | m120228_171636_42139_c100301722550000001523012308061205_s1_p0.bas.h5<br> | ||
| + | We have run smrtpipe.py ([https://github.com/PacificBiosciences/SMRT-Analysis/wiki/SMRT-Pipe-Reference-Guide-v2.0 SMRT analysis]) with the following params.xml to get filtered subreads of continuous long reads (CLR). | ||
| + | <param name="minLength"> | ||
| + | <value>50</value> | ||
| + | </param> | ||
| + | <param name="readScore"> | ||
| + | <value>0.75</value> | ||
| + | </param> | ||
| + | <param name="minSubReadLength"> | ||
| + | <value>50</value> | ||
| ==Randomly Selected Four SMRT cells== | ==Randomly Selected Four SMRT cells== | ||
| ===First Set=== | ===First Set=== | ||