Version Differences for R. sphaeroides

Revision as of 19 October 2013 01:42

(→Evaluation)

Revision as of 19 October 2013 01:56

(→Evaluation)

 |-
-								| # contigs||14||1||1||1
+								| # contigs||13||11||10||11
 |-
-								| Largest contig||4625005||4638970||4638970||4638970
+								| Largest contig||3188540||3188818||3188847||3188802
 |-
-								| Total length||4652215||4638970||4638970||4638970
+								| Total length||4588701||4601792||4609235||4601762
 |-
-								| N50||4625005||4638970||4638970||4638970
+								| N50||3188540||3188818||3188847||3188802
 |-
 | align="left" style="background:#f0f0f0;"|'''Misassemblies'''
-								| # misassemblies||5||1||1||1
+								| # misassemblies||12||16||20||19
 |-
-								|Misassembled contigs length ||4625005||4638970||4638970||4638970
+								|Misassembled contigs length ||4361060||4370092||4557570||4484253
 |-
 | align="left" style="background:#f0f0f0;"|'''Mismatches'''
-								|# mismatches per 100kbp ||1.06||0.11||0.06||0.06
+								|# mismatches per 100kbp ||3.77||3.48||4.8||6.43
 |-
-								|# indels per 100kbp ||0.61||0.09||0.09||0.11
+								|# indels per 100kbp ||5.13||3.52||4.87||5.61
 |-
-								|# N's per 100kbp ||282.94||0||0||0
+								|# N's per 100kbp ||0.09||0||0.13||0.07
 |-
 | align="left" style="background:#f0f0f0;"|'''Genome statistics'''
-								| Genome fraction (%)||99.418||99.983||99.983||99.983
+								| Genome fraction (%)||99.683||99.932||99.948||99.945
 |-
-								| Duplication ratio ||1.013||1||1||1
+								| Duplication ratio ||1.005||1.011||1.009||1.007
 |-
-								| # genes||4471 + 2 part　||4494 + 1 part　||4494 + 1 part　||4495 + 0 part
+								| # genes||4369 + 10 part　||4381 + 6 part　||4380+ 7 part　||4378 + 8 part
 |-
-								| NGA50 || 2714032 || 4638970 || 3763133 || 4032768
+								| NGA50 || 2938269 || 904505 || 2715665 || 3170709
 |-
 |}