Version Differences for R. sphaeroides

Revision as of 19 October 2013 01:56

(→Evaluation)

Revision as of 19 October 2013 02:10

(→Evaluation)

 |-
-								| # contigs||1||2||5||3
+								| # contigs||57||31||32||26
 |-
-								| Largest contig||4633080||4631220||4575759||4560636
+								| Largest contig||3186675||3188995||1674993||3190277
 |-
-								| Total length||4633080||4633146||4698903||4713335
+								| Total length||4583750||4592561||4620837||4607723
 |-
-								| N50||4633080||4631220||4575759||4590636
+								| N50||4633080||3186675||3188995||1492665||3190277
 |-
 | align="left" style="background:#f0f0f0;"|'''Misassemblies'''
-								| # misassemblies||7||3||8||8
+								| # misassemblies||6||9||17||27
 |-
-								|Misassembled contigs length ||4633080||4631220||4577746||4711603
+								|Misassembled contigs length ||4147900||4205887||2637662||4422750
 |-
 | align="left" style="background:#f0f0f0;"|'''Mismatches'''
-								|# mismatches per 100kbp ||1.42||1.19||2.84||1.89
+								|# mismatches per 100kbp ||4.23||5.81||7.49||10.76
 |-
-								|# indels per 100kbp ||0.83||1.13||3.26||0.61
+								|# indels per 100kbp ||3.57||5.64||4.72||8.94
 |-
-								|# N's per 100kbp ||1545.02||533.22||698.87||801.7
+								|# N's per 100kbp ||149.31||120.74||197.84||812.74
 |-
 | align="left" style="background:#f0f0f0;"|'''Genome statistics'''
-								| Genome fraction (%)||98.343||99.345||99.265||99.284
+								| Genome fraction (%)||98.789||99.45||99.468||98.896
 |-
-								| Duplication ratio ||1.016||1.012||1.021||1.028
+								| Duplication ratio ||1.022||1.018||1.015||1.02
 |-
-								| # genes||4395 + 31 part　||4465 + 11 part　||4460 + 14 part　||4459 + 9 part
+								| # genes||4313 + 47 part　||4348 + 27 part　||4343 + 31 part　||4266 + 101 part
 |-
-								| NGA50 ||687701||3180483||654008||1295677
+								| NGA50 ||3180491||3182258||1487141||546353
 |-
 |}