Version Differences for RunCA

Line 52:
  |-    |- 
  |}    |} 
       
    + {| {{table}} border="1"  
    + | align="center" style="background:#f0f0f0;"|'''Statistics without reference'''  
    + | align="center" style="background:#f0f0f0;"|'''wo_all_runCA1'''  
    + | align="center" style="background:#f0f0f0;"|'''wo_all_runCA2'''  
    + | align="center" style="background:#f0f0f0;"|'''wo_25X_runCA1'''  
    + | align="center" style="background:#f0f0f0;"|'''wo_25X_runCA2'''  
    + | align="center" style="background:#f0f0f0;"|'''w_all_runCA1'''  
    + | align="center" style="background:#f0f0f0;"|'''w_all_runCA2'''  
    + | align="center" style="background:#f0f0f0;"|'''w_25X_runCA1'''  
    + | align="center" style="background:#f0f0f0;"|'''w_25X_runCA2'''  
    + |-  
    + | # contigs||248||302||15||36||36||76||17||37  
    + |-  
    + | Largest contig||762617||578194||1341765||694845||2069213||1204169||2021284||1754178  
    + |-  
    + | Total length||5539907||6343154||4656826||4814122||4943194||5322102||4800259||5002926  
    + |-  
    + | N50||371897||142793||1155479||460790||1478089||496729||1215597||1253429  
    + |-  
    + | Misassemblies||||||||||||||||  
    + |-  
    + | # misassemblies||36||38||8||14||12||17||11||15  
    + |-  
    + | Misassembled contigs length||1443585||1419385||2506591||1302083||3703087||1183356||2022749||2142054  
    + |-  
    + | Mismatches||||||||||||||||  
    + |-  
    + | # mismatches per 100 kbp||2.81||1.150||0.7||0.76||3.66||3.88||4.310||4.33  
    + |-  
    + | # indels per 100 kbp||12.97||8.02||2.19||2.54||0.52||0.86||1.06||0.65  
    + |-  
    + | # N's per 100 kbp||1.32||0.38||0||0||0||0.15||0.02||0.2  
    + |-  
    + | Genome statistics||||||||||||||||  
    + |-  
    + | Genome fraction (%)||99.858||99.651||99.189||99.196||100||100||100||100  
    + |-  
    + | Duplication ratio||1.195||1.373||1.012||1.046||1.066||1.148||1.035||1.079  
    + |-  
    + | # genes||4484 + 10 part||4481 + 12 part||4466 + 11 part||4466 + 11 part||4494 + 3 part||4494 + 3 part||4494 + 3 part||4493 + 4 part  
    + |-  
    + | NGA50||411646||230980||694825||366166||670145||677677||877912||834940  
    + |-  
    + |}