| Line 134: |
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| align="left" style="background:#f0f0f0;"|[[Media: Allpaths_D3.pdf | '''Misassemblies''']] |
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| align="left" style="background:#f0f0f0;"|[[Media: Allpaths_D3.pdf | '''Misassemblies''']] |
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|- |
|
|- |
| - |
| # misassemblies||4||1||3||0||1||3||7
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+ |
| # misassemblies||3||2||2||0||1||2||3
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|- |
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|- |
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|Misassembled contigs length ||2162245||1340620||2151421||0||2149064||2150940||1659817 |
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|Misassembled contigs length ||2162245||1340620||2151421||0||2149064||2150940||1659817 |
| Line 140: |
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
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|- |
| - |
|# mismatches per 100kbp ||5.7||2.15||2.05||2.05||2.1||2.05||2.22
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+ |
|# mismatches per 100kbp ||5.7||2.15||2.05||2.05||2.1||2.05||1.74
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|- |
|
|- |
| - |
|# indels per 100kbp ||3.52||1.08||0.93||3.08||0.93||0.98||13.48
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+ |
|# indels per 100kbp ||1.53||1.08||0.93||0.98||0.93||0.98||1.93
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|- |
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|# N's per 100kbp ||0.05||0.14||0.09||0.14||171.89||0.09||1268.03 |
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|# N's per 100kbp ||0.05||0.14||0.09||0.14||171.89||0.09||1268.03 |
| Line 148: |
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| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
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| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
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|- |
|
|- |
| - |
| Genome fraction (%)||99.946||99.967||99.45||99.239||99.239||99.43||98.23
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+ |
| Genome fraction (%)||99.946||99.862||99.45||99.239||99.239||99.43||98.168
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|- |
|
|- |
| - |
| Duplication ratio ||1.011||1.005||1.016||1.015||1.017||1.016||1.032
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+ |
| Duplication ratio ||1.002||1.002||1.001||1.001||1.002||1.001||1.013
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|- |
| - |
| # genes||2297 + 4 part ||2299 + 2 part ||2297 + 4 part||2294+ 4 part ||2294 + 4 part ||2297 + 4 part ||2260 + 19 part
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+ |
| # genes||2297 + 4 part ||2283 + 10 part ||2297 + 4 part||2294+ 4 part ||2294 + 4 part ||2297 + 4 part ||2257 + 22 part
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|- |
|
|- |
| - |
| NGA50 ||1198037||1338442||1189098||1188680||1188680||1189098||483405
|
+ |
| NGA50 ||1197408||469127||1189418||1188680||1188680||1189418||1234602
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|- |
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 1hr16m ||6hr 05m ||41m ||53m ||44m ||39m ||1hr 06m |
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 1hr16m ||6hr 05m ||41m ||53m ||44m ||39m ||1hr 06m |
